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BaseInfo

ncRNA ID	novel_zma_miR4738
Species	Zea mays
Class	miRNA
Genome position	Chr2:149966419-149966555 [+]
Reference genome	RefGen_v4
Source	SRR1618882
Length	24
Mature sequence(if miRNA)	114 - CGGCUCGGCUCGAAGGUGGCUCGC - 137
Stem-loop(if miRNA)	--      GAAA                  G   -G   U    CGGUGCAGCUCGGUAGCUGACCGAG   GGGCUA    CGAGCCGAGCCGAGCUUG CUC  GCU GGCU                         C   ||||||    |||||||||||||||||| |||  ||| ||||                         U   CUCGGU    GCUCGGCUCGGCUCGGAC GAG  GUC GAGC                         C CG      GGAA                  A   GC   -    ACUUUACCCGCUCGGCUCGGCUCGG
Stem-loop sequence	GGGCUAGAAACGAGCCGAGCCGAGCUUGGCUCGGCUUGGCUCGGUGCAGCUCGGUAGCUGACCGAGCUCGGCUCGGCUCGGCUCGCCCAUUUCACGAGCUGCGGAGACAGGCUCGGCUCGGCUCGAAGGUGGCUCGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KJ727594.1	ncRNA:24   CGCUCGGUGGAAGCUCGGCUCGGC   1   |=||-|||*|||||||||*||||| targets:910   GUGA-CCAACUUCGAGCCCAGCCG   932 Target Full Sequence	2.5	Zea mays clone pUT5454 AP2-EREBP transcription factor (EREB26) mRNA, partial cds	NA	coding protein	psRNATarget
BT070198.1	ncRNA:24   CGCUCGGUGGAAGCUCGGCUCGGC   1   |=||-|||*|||||||||*||||| targets:1065   GUGA-CCAACUUCGAGCCCAGCCG   1087 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0189L07 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176995.1	ncRNA:24   CGCUCGGUGGAAGCUCGGCUCGGC   1   |=||-|||*|||||||||*||||| targets:1065   GUGA-CCAACUUCGAGCCCAGCCG   1087 Target Full Sequence	2.5	Zea mays putative AP2/EREBP transcription factor superfamily protein (EREB26), mRNA	NA	coding protein	psRNATarget