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BaseInfo

ncRNA ID	novel_zma_miR4723
Species	Zea mays
Class	miRNA
Genome position	Chr1:192682109-192682162 [-]
Reference genome	RefGen_v4
Source	SRR2287162
Length	24
Mature sequence(if miRNA)	31 - CGGCCCUGAGGCCGGACUGUCCGC - 54
Stem-loop(if miRNA)	--       G    -         C C   CGGCCCU AGGC CGGACUGUC G G   ||||||| |||| ||||||||| | G   GCCGGGG UCCG GCCUGGCAG C U AG       G    C         A C
Stem-loop sequence	CGGCCCUGAGGCCGGACUGUCCGCGGUCCAGACGGUCCGCGCCUGGGGGCCGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU947355.1	ncRNA:24   CGCCUGUCAGGCCGGAGUCCCGGC   1   ||||||*||||||||||||||||| targets:88   GCGGACCGUCCGGCCUCAGGGCCG   111 Target Full Sequence	1.0	Zea mays clone 340715 mRNA sequence	NA	coding protein	psRNATarget
BT034345.1	ncRNA:24   CGCCUGUCAGGCCGGAGUCCCGGC   1   ||||||*||||||||||||||||| targets:753   GCGGACCGUCCGGCCUCAGGGCCG   776 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0009F02 mRNA, complete cds	NA	coding protein	psRNATarget
EU940813.1	ncRNA:24   CGCCUGUCAGGCCGGAGUCCCGGC   1   ||||||*||||||||||||||||| targets:78   GCGGACCGUCCGGCCUCAGGGCCG   101 Target Full Sequence	1.0	Zea mays clone 1145688 mRNA sequence	NA	coding protein	psRNATarget
XM_020550306.1	ncRNA:24   CGCCUGUCAGGCCGGAGUCCCGGC   1   ||||||*||||||||||||||||| targets:214   GCGGACCGUCCGGCCUCAGGGCCG   237 Target Full Sequence	1.0	PREDICTED: Zea mays enolase 1-like (LOC103650544), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008676122.2	ncRNA:24   CGCCUGUCAGGCCGGAGUCCCGGC   1   ||||||*||||||||||||||||| targets:214   GCGGACCGUCCGGCCUCAGGGCCG   237 Target Full Sequence	1.0	PREDICTED: Zea mays enolase 1-like (LOC103650544), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008676123.2	ncRNA:24   CGCCUGUCAGGCCGGAGUCCCGGC   1   ||||||*||||||||||||||||| targets:214   GCGGACCGUCCGGCCUCAGGGCCG   237 Target Full Sequence	1.0	PREDICTED: Zea mays enolase 1-like (LOC103650544), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008676121.2	ncRNA:24   CGCCUGUCAGGCCGGAGUCCCGGC   1   ||||||*||||||||||||||||| targets:214   GCGGACCGUCCGGCCUCAGGGCCG   237 Target Full Sequence	1.0	PREDICTED: Zea mays enolase 1-like (LOC103650544), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ061701.1	ncRNA:24   CGCCUGUCAGGCCGGAGUCCCGGC   1   *|||||*||||||||||||||||| targets:202   ACGGACCGUCCGGCCUCAGGGCCG   225 Target Full Sequence	1.0	TSA: Zea mays contig62823, mRNA sequence	NA	coding protein	psRNATarget
EZ059430.1	ncRNA:24   CGCCUGUCAGGCCGGAGUCCCGGC   1   ||||||*|||||||||||||*||| targets:65   GCGGACCGUCCGGCCUCAGGCCCG   88 Target Full Sequence	2.5	TSA: Zea mays contig60552, mRNA sequence	NA	coding protein	psRNATarget