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BaseInfo

ncRNA ID novel_zma_miR4711
Species Zea mays
Class miRNA
Genome position Chr1:240308333-240308432 [+]
Reference genome RefGen_v4
Source SRR2287162
Length 24
Mature sequence(if miRNA) 1 - CAAUCCAUAUGGAUUGUAGGGGAU - 24
Stem-loop(if miRNA) --     C          U     AUUGAUAUA       A   A   UG -   A
  CAAUC AUAUGGAUUG AGGGG         GAUUGAG GGG UUU  A CUU U
  ||||| |||||||||| |||||         ||||||| ||| |||  | |||
  GUUAG UAUACCUAAC UCCCC         CUAACUC CCC AAA  U GGG U
GG     U          -     ---------       -   C   GU A   A
Stem-loop sequence CAAUCCAUAUGGAUUGUAGGGGAUUGAUAUAGAUUGAGAGGGAUUUUGACUUAUUAGGGAUUGAAACCCCCUCAAUCCCCCUCAAUCCAUAUUGAUUGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT055069.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:979   AUCCCCUUCAAUCCAUAUGGAUUG   1002

1.0 Zea mays full-length cDNA clone ZM_BFb0132H13 mRNA, complete cds NA coding protein psRNATarget
BT055069.1
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:892   GUUCGGUUCUACCCCAAUCCAUAUGGAUUG   921

3.0 Zea mays full-length cDNA clone ZM_BFb0132H13 mRNA, complete cds NA coding protein psRNATarget
XM_008658561.2
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:304   AUCCCCUCCAAUCCAUAUGGAUUG   327

1.0 PREDICTED: Zea mays mitogen-activated protein kinase kinase kinase 2 (LOC103636208), mRNA NA coding protein psRNATarget
XM_020548987.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:1983   AUCCCCUCCAAUCCAUAUGGAUUG   2006

1.0 PREDICTED: Zea mays uncharacterized LOC103648913 (LOC103648913), mRNA NA coding protein psRNATarget
XM_020548987.1
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:1905   GUUCGGUUCUACCCCAAUCCAUAUGGAUUG   1934

3.0 PREDICTED: Zea mays uncharacterized LOC103648913 (LOC103648913), mRNA NA coding protein psRNATarget
XM_008673290.2
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:1983   AUCCCCUCCAAUCCAUAUGGAUUG   2006

1.0 PREDICTED: Zea mays uncharacterized LOC103648912 (LOC103648912), mRNA NA coding protein psRNATarget
XM_008673290.2
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:1905   GUUCGGUUCUACCCCAAUCCAUAUGGAUUG   1934

3.0 PREDICTED: Zea mays uncharacterized LOC103648912 (LOC103648912), mRNA NA coding protein psRNATarget
XM_008658331.2
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:1701   AUCCCCUUCAAUCCAUAUGGAUUG   1724

1.0 PREDICTED: Zea mays putative protein phosphatase 2C 46 (LOC103635969), mRNA NA coding protein psRNATarget
XM_020545207.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:25   AUCCCCUCCAAUCCAUAUGGAUUG   48

1.0 PREDICTED: Zea mays solute carrier family 25 member 44 (LOC100384216), mRNA NA coding protein psRNATarget
BT041454.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:1500   AUCCCCUUCAAUCCAUAUGGAUUG   1523

1.0 Zea mays full-length cDNA clone ZM_BFc0061I22 mRNA, complete cds NA coding protein psRNATarget
NM_001148011.2
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:1500   AUCCCCUUCAAUCCAUAUGGAUUG   1523

1.0 Zea mays uncharacterized LOC100273594 (AY105910), mRNA NA coding protein psRNATarget
AY105910.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:1486   AUCCCCUUCAAUCCAUAUGGAUUG   1509

1.0 Zea mays PCO106969 mRNA sequence NA coding protein psRNATarget
BT040193.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:1468   AUCCCCUUCAAUCCAUAUGGAUUG   1491

1.0 Zea mays full-length cDNA clone ZM_BFc0070L08 mRNA, complete cds NA coding protein psRNATarget
BT064472.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:1424   AUCCCCUUCAAUCCAUAUGGAUUG   1447

1.0 Zea mays full-length cDNA clone ZM_BFc0172D22 mRNA, complete cds NA coding protein psRNATarget
BT055467.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:1201   AUCCCCUCCAAUCCAUAUGGAUUG   1224

1.0 Zea mays full-length cDNA clone ZM_BFb0279E03 mRNA, complete cds NA coding protein psRNATarget
BT055467.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*|=||||||||||||||
targets:1088   AUCCCCUCCGAUCCAUAUGGAUUG   1111

2.0 Zea mays full-length cDNA clone ZM_BFb0279E03 mRNA, complete cds NA coding protein psRNATarget
XM_020548080.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:1163   AUCCCCUCCAAUCCAUAUGGAUUG   1186

1.0 PREDICTED: Zea mays translation initiation factor IF-2-like (LOC109943947), mRNA NA coding protein psRNATarget
XM_020548080.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*|=||||||||||||||
targets:1050   AUCCCCUCCGAUCCAUAUGGAUUG   1073

2.0 PREDICTED: Zea mays translation initiation factor IF-2-like (LOC109943947), mRNA NA coding protein psRNATarget
XM_008666525.2
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:920   AUCCCCUCCAAUCCAUAUGGAUUG   943

1.0 PREDICTED: Zea mays mitochondrial import inner membrane translocase subunit TIM23-1 (LOC100282051), mRNA NA coding protein psRNATarget
XM_008666525.2
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:860   GUUCGGUUCUACCCCAAUCCAUAUGGAUUG   889

3.0 PREDICTED: Zea mays mitochondrial import inner membrane translocase subunit TIM23-1 (LOC100282051), mRNA NA coding protein psRNATarget
EU959345.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:848   AUCCCCUCCAAUCCAUAUGGAUUG   871

1.0 Zea mays clone 217290 mitochondrial import inner membrane translocase subunit tim23 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
EU959345.1
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:788   GUUCGGUUCUACCCCAAUCCAUAUGGAUUG   817

3.0 Zea mays clone 217290 mitochondrial import inner membrane translocase subunit tim23 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
EU959258.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:847   AUCCCCUCCAAUCCAUAUGGAUUG   870

1.0 Zea mays clone 213262 mitochondrial import inner membrane translocase subunit tim23 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
EU959258.1
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:787   GUUCGGUUCUACCCCAAUCCAUAUGGAUUG   816

3.0 Zea mays clone 213262 mitochondrial import inner membrane translocase subunit tim23 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
EU959053.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:847   AUCCCCUCCAAUCCAUAUGGAUUG   870

1.0 Zea mays clone 209789 mitochondrial import inner membrane translocase subunit tim23 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
EU959055.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:849   AUCCCCUCCAAUCCAUAUGGAUUG   872

1.0 Zea mays clone 209821 mRNA sequence NA coding protein psRNATarget
BT062922.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:901   AUCCCCUCCAAUCCAUAUGGAUUG   924

1.0 Zea mays full-length cDNA clone ZM_BFc0007N17 mRNA, complete cds NA coding protein psRNATarget
BT062922.1
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:841   GUUCGGUUCUACCCCAAUCCAUAUGGAUUG   870

3.0 Zea mays full-length cDNA clone ZM_BFc0007N17 mRNA, complete cds NA coding protein psRNATarget
XM_020539810.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:702   AUCCCCUCCAAUCCAUAUGGAUUG   725

1.0 PREDICTED: Zea mays uncharacterized LOC109940330 (LOC109940330), mRNA NA coding protein psRNATarget
XM_020539810.1
ncRNA:24   UAG--GGGAU---GUUAGGUAUACCUAAC   1
  *||--==|||---||||||||||||||||
targets:626   UUCGGUUCUAACCCAAUCCAUAUGGAUUG   654

3.0 PREDICTED: Zea mays uncharacterized LOC109940330 (LOC109940330), mRNA NA coding protein psRNATarget
NM_001348011.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*||||||||||||||||
targets:448   AUCCCCUCCAAUCCAUAUGGAUUG   471

1.0 Zea mays hypothetical protein (LOC100277538), mRNA NA coding protein psRNATarget
NM_001348011.1
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:360   GUUCGGUUCUACCCCAAUCCAUAUGGAUUG   389

3.0 Zea mays hypothetical protein (LOC100277538), mRNA NA coding protein psRNATarget
XM_008654469.2
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||=|||*||||||||||||||||
targets:3123   AUCUCCUUCAAUCCAUAUGGAUUG   3146

1.0 PREDICTED: Zea mays U-box domain-containing protein 35 (LOC103632728), mRNA NA coding protein psRNATarget
BT055765.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||=|*||||||||||||||||
targets:2324   AUCCCUUCCAAUCCAUAUGGAUUG   2347

2.0 Zea mays full-length cDNA clone ZM_BFb0178P09 mRNA, complete cds NA coding protein psRNATarget
NM_001153131.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||=|*||||||||||||||||
targets:2324   AUCCCUUCCAAUCCAUAUGGAUUG   2347

2.0 Zea mays putative protein kinase superfamily protein (LOC100280200), mRNA NA coding protein psRNATarget
BT024027.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||=|*||||||||||||||||
targets:1646   AUCCCUUCCAAUCCAUAUGGAUUG   1669

2.0 Zea mays clone EL01N0420G12 mRNA sequence NA coding protein psRNATarget
EU953075.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||=|||*||||||||||||||||
targets:1011   AUCUCCUCCAAUCCAUAUGGAUUG   1034

1.0 Zea mays clone 1380292 mRNA sequence NA coding protein psRNATarget
BT064935.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||=|*||||||||||||||||
targets:839   AUCCCUUCCAAUCCAUAUGGAUUG   862

2.0 Zea mays full-length cDNA clone ZM_BFc0035J15 mRNA, complete cds NA coding protein psRNATarget
EU956568.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*|||||||||||||||*
targets:1633   AUCCCCUCCAAUCCAUAUGGAUUA   1656

2.0 Zea mays clone 1566799 mRNA sequence NA coding protein psRNATarget
EZ075586.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  ||=|=*||||||||||||||||||
targets:37   AUUCUAUACAAUCCAUAUGGAUUG   60

1.0 TSA: Zea mays contig11223, mRNA sequence NA coding protein psRNATarget
XM_008680349.2
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  ||||||**||||||||||||||||
targets:1972   AUCCCCCUCAAUCCAUAUGGAUUG   1995

2.0 PREDICTED: Zea mays peptidase/ serine-type peptidase (LOC100284377), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008680349.2
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  =|=*==|*||||||||||||||||
targets:1890   GUUAUUUUCAAUCCAUAUGGAUUG   1913

2.0 PREDICTED: Zea mays peptidase/ serine-type peptidase (LOC100284377), transcript variant X1, mRNA NA coding protein psRNATarget
EU955707.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  ||||||**||||||||||||||||
targets:609   AUCCCCCUCAAUCCAUAUGGAUUG   632

2.0 Zea mays clone 1543022 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT068463.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  ||||||**||||||||||||||||
targets:1212   AUCCCCCUCAAUCCAUAUGGAUUG   1235

2.0 Zea mays full-length cDNA clone ZM_BFb0213N24 mRNA, complete cds NA coding protein psRNATarget
BT061531.2
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  ||||||**||||||||||||||||
targets:852   AUCCCCCUCAAUCCAUAUGGAUUG   875

2.0 Zea mays full-length cDNA clone ZM_BFb0155L17 mRNA, complete cds NA coding protein psRNATarget
BT061531.2
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  =|=*==|*||||||||||||||||
targets:770   GUUAUUUUCAAUCCAUAUGGAUUG   793

2.0 Zea mays full-length cDNA clone ZM_BFb0155L17 mRNA, complete cds NA coding protein psRNATarget
EU972032.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  ||||||**||||||||||||||||
targets:940   AUCCCCCUCAAUCCAUAUGGAUUG   963

2.0 Zea mays clone 373636 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001151506.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  ||||||**||||||||||||||||
targets:940   AUCCCCCUCAAUCCAUAUGGAUUG   963

2.0 Zea mays ER membrane protein complex subunit 7-like protein (pco145885(696)), mRNA NA coding protein psRNATarget
BT068594.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  ||||||**||||||||||||||||
targets:910   AUCCCCCUCAAUCCAUAUGGAUUG   933

2.0 Zea mays full-length cDNA clone ZM_BFb0348O14 mRNA, complete cds NA coding protein psRNATarget
AY104043.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  ||||||**||||||||||||||||
targets:913   AUCCCCCUCAAUCCAUAUGGAUUG   936

2.0 Zea mays PCO145885 mRNA sequence NA coding protein psRNATarget
EU951312.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  ||||||**||||||||||||||||
targets:373   AUCCCCCUCAAUCCAUAUGGAUUG   396

2.0 Zea mays clone 695515 mRNA sequence NA coding protein psRNATarget
LQ241947.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  ||||||**||||||||||||||||
targets:83   AUCCCCCUCAAUCCAUAUGGAUUG   106

2.0 Sequence 7942 from Patent EP2985353 NA coding protein psRNATarget
LQ241947.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  =|=*==|*=|||||||||||||||
targets:1   GUUAUUUUUAAUCCAUAUGGAUUG   24

3.0 Sequence 7942 from Patent EP2985353 NA coding protein psRNATarget
JB170278.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  ||||||**||||||||||||||||
targets:83   AUCCCCCUCAAUCCAUAUGGAUUG   106

2.0 Sequence 7942 from Patent EP2559767 NA coding protein psRNATarget
JB170278.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  =|=*==|*=|||||||||||||||
targets:1   GUUAUUUUUAAUCCAUAUGGAUUG   24

3.0 Sequence 7942 from Patent EP2559767 NA coding protein psRNATarget
HI409817.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  ||||||**||||||||||||||||
targets:83   AUCCCCCUCAAUCCAUAUGGAUUG   106

2.0 Sequence 7942 from Patent EP2074227 NA coding protein psRNATarget
HI409817.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  =|=*==|*=|||||||||||||||
targets:1   GUUAUUUUUAAUCCAUAUGGAUUG   24

3.0 Sequence 7942 from Patent EP2074227 NA coding protein psRNATarget
JB166898.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*|||||||*||||||||
targets:77   AUCCCCUCCAAUCCACAUGGAUUG   100

2.5 Sequence 4562 from Patent EP2559767 NA coding protein psRNATarget
LQ238567.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*|||||||*||||||||
targets:77   AUCCCCUCCAAUCCACAUGGAUUG   100

2.5 Sequence 4562 from Patent EP2985353 NA coding protein psRNATarget
HI406437.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||||||*|||||||*||||||||
targets:77   AUCCCCUCCAAUCCACAUGGAUUG   100

2.5 Sequence 4562 from Patent EP2074227 NA coding protein psRNATarget
NM_001138093.1
ncRNA:24   UAGG-----GGAUGUUAGGUAUACCUAAC   1
  ||=|-----==|*||||||||||||||||
targets:1524   AUUCGGUUAUUUUCAAUCCAUAUGGAUUG   1552

2.0 Zea mays uncharacterized LOC100192906 (LOC100192906), mRNA NA coding protein psRNATarget
BT035012.1
ncRNA:24   UAGG-----GGAUGUUAGGUAUACCUAAC   1
  ||=|-----==|*||||||||||||||||
targets:1524   AUUCGGUUAUUUUCAAUCCAUAUGGAUUG   1552

2.0 Zea mays full-length cDNA clone ZM_BFb0031M23 mRNA, complete cds NA coding protein psRNATarget
EU962730.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  =|=*==|*=|||||||||||||||
targets:994   GUUAUUUUUAAUCCAUAUGGAUUG   1017

3.0 Zea mays clone 245054 mRNA sequence NA coding protein psRNATarget
HI408824.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  =|=*==|*||||||||||||||||
targets:2   GUUAUUUUCAAUCCAUAUGGAUUG   25

2.0 Sequence 6949 from Patent EP2074227 NA coding protein psRNATarget
LQ240954.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  =|=*==|*||||||||||||||||
targets:2   GUUAUUUUCAAUCCAUAUGGAUUG   25

2.0 Sequence 6949 from Patent EP2985353 NA coding protein psRNATarget
JB169285.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  =|=*==|*||||||||||||||||
targets:2   GUUAUUUUCAAUCCAUAUGGAUUG   25

2.0 Sequence 6949 from Patent EP2559767 NA coding protein psRNATarget
EU972046.1
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:699   GUUCGGUUCUACCCCAAUCCAUAUGGAUUG   728

3.0 Zea mays clone 373861 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU964104.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  *|=*|=|||=||||||||||||||
targets:856   CUUGCUUACGAUCCAUAUGGAUUG   879

2.0 Zea mays clone 275913 VQ motif family protein mRNA, complete cds NA coding protein psRNATarget
NM_001156173.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  *|=*|=|||=||||||||||||||
targets:856   CUUGCUUACGAUCCAUAUGGAUUG   879

2.0 Zea mays VQ motif family protein (LOC100283271), mRNA NA coding protein psRNATarget
EZ101759.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  =|=*==|*||||||||||||||||
targets:24   GUUAUUUUCAAUCCAUAUGGAUUG   47

2.0 TSA: Zea mays contig37415, mRNA sequence NA coding protein psRNATarget
XM_008672210.2
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:1678   GUUCGGUUCUACCCCAAUCCAUAUGGAUUG   1707

3.0 PREDICTED: Zea mays uncharacterized LOC100277216 (LOC100277216), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008672211.2
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:886   GUUCGGUUCUACCCCAAUCCAUAUGGAUUG   915

3.0 PREDICTED: Zea mays uncharacterized LOC100277216 (LOC100277216), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001156482.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||*|||*||||||||||*|||||
targets:891   AUCACCUCCAAUCCAUAUAGAUUG   914

2.5 Zea mays threonine endopeptidase (LOC100283581), mRNA NA coding protein psRNATarget
EU965203.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  |||*|||*||||||||||*|||||
targets:891   AUCACCUCCAAUCCAUAUAGAUUG   914

2.5 Zea mays clone 284456 threonine endopeptidase mRNA, complete cds NA coding protein psRNATarget
EU961636.1
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:1044   GUUCGGUUCUACCCCAAUCCAUAUGGAUUG   1073

3.0 Zea mays clone 237217 mRNA sequence NA coding protein psRNATarget
XM_020549355.1
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:854   GUUCGAUUCUACCCCAAUCCAUAUGGAUUG   883

3.0 PREDICTED: Zea mays succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial (LOC109944584), mRNA NA coding protein psRNATarget
EZ061352.1
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:113   GUUCGGUUCUACCCCAAUCCAUAUGGAUUG   142

3.0 TSA: Zea mays contig62474, mRNA sequence NA coding protein psRNATarget
JB167104.1
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:13   GUUCGUUUCUACCCCAAUCCAUAUGGAUUG   42

3.0 Sequence 4768 from Patent EP2559767 NA coding protein psRNATarget
HI406643.1
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:13   GUUCGUUUCUACCCCAAUCCAUAUGGAUUG   42

3.0 Sequence 4768 from Patent EP2074227 NA coding protein psRNATarget
LQ238773.1
ncRNA:24   UAGG---GGAUG---UUAGGUAUACCUAAC   1
  =|=|---=||||---|||||||||||||||
targets:13   GUUCGUUUCUACCCCAAUCCAUAUGGAUUG   42

3.0 Sequence 4768 from Patent EP2985353 NA coding protein psRNATarget
BT018999.1
ncRNA:24   UAGGGGAUGUUAGGUAUACCUAAC   1
  =|=*==|*||||||||||||||||
targets:386   GUUAUUUUCAAUCCAUAUGGAUUG   409

2.0 Zea mays clone Contig487.F mRNA sequence NA coding protein psRNATarget
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