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BaseInfo

ncRNA ID	novel_zma_miR4710
Species	Zea mays
Class	miRNA
Genome position	Chr9:157960747-157960829 [-]
Reference genome	RefGen_v4
Source	SRR2287162;SRR4237224;SRR4237225
Length	20
Mature sequence(if miRNA)	64 - CGGAGGGGUUGGAGGGGCUA - 83
Stem-loop(if miRNA)	--      -     G              C  C      CAA   CGGAGG GGUUG AGGGGCUAAAAUCC CU UUUAUU   U   |||||| ||||| |||||||||||||| || ||||||   GUCUCC CUAAU UCCCCGAUUUUAGG GA AAAUAA   U UU      A     A              U  A      AUU
Stem-loop sequence	CGGAGGGGUUGGAGGGGCUAAAAUCCCCUCUUUAUUCAAUUUUAAAUAAAAAGUGGAUUUUAGCCCCUAUAAUCACCUCUGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020539411.1	ncRNA:20   AUCGGGGAGGUU-GGGGAGGC   1   ||||||||||||-|||||||| targets:3500   UAGCCCCUCCAAUCCCCUCCG   3520 Target Full Sequence	3.0	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020539397.1	ncRNA:20   AUCGGGGAGGUU-GGGGAGGC   1   ||||||||||||-|||||||| targets:3535   UAGCCCCUCCAAUCCCCUCCG   3555 Target Full Sequence	3.0	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008654855.2	ncRNA:20   AUCGGGGAGGUUGGGGAGGC   1   *|||=||||||||*|||||| targets:587   GAGCUCCUCCAACGCCUCCG   606 Target Full Sequence	2.5	PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 (LOC103633167), mRNA	NA	coding protein	psRNATarget
XM_020552153.1	ncRNA:20   AUCGGGGAGGUUGGGGAGGC   1   *||||||||||*|||||||* targets:522   GAGCCCCUCCAUCCCCUCCU   541 Target Full Sequence	2.5	PREDICTED: Zea mays basic proline-rich protein-like (LOC103655473), mRNA	NA	coding protein	psRNATarget