Search result

BaseInfo

ncRNA ID	novel_zma_miR4706
Species	Zea mays
Class	miRNA
Genome position	Chr9:134142823-134142965 [+]
Reference genome	RefGen_v4
Source	SRR2287162;SRR2287163;SRR2089700
Length	21
Mature sequence(if miRNA)	123 - UUAGAUUUAAGAUGGAUGCUG - 143
Stem-loop(if miRNA)	--U   A     C           C         CU U        A    U      U  CACCACUCCA    CAU CAUCU AGAUCUAACGU UCUAGUUGC  G UAUAUUUU CAAA AACACC UC          C    ||| ||||| ||||||||||| |||||||||  | |||||||| |||| |||||| ||          U    GUA GUAGA UUUAGAUUGUA AGAUCAACG  U AUAUAAAA GUUU UUGUGG AG          C GUC   G     A           A         AG C        C    C      U  ACUUCACCAC
Stem-loop sequence	UCAUACAUCUCAGAUCUAACGUCUCUAGUUGCCUGUUAUAUUUUACAAAUAACACCUUCCACCACUCCACUCCACCACUUCAGAUGGUGUUCUUUGCAAAAUAUACUGAGCAACUAGAAAUGUUAGAUUUAAGAUGGAUGCUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU954723.1	ncRNA:21   GUCGUAGGUAGAAUUUAGAUU   1   ==|||||||||||=||||||* targets:2191   UGGCAUCCAUCUUGAAUCUAU   2211 Target Full Sequence	2.5	Zea mays clone 1479261 mRNA sequence	NA	coding protein	psRNATarget
XM_008681740.2	ncRNA:21   GUCGUAGGUAGAAUUUAGAUU   1   ==|||||||||||=||||||* targets:1888   UGGCAUCCAUCUUGAAUCUAU   1908 Target Full Sequence	2.5	PREDICTED: Zea mays S-(+)-linalool synthase, chloroplastic-like (LOC103654934), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008681741.2	ncRNA:21   GUCGUAGGUAGAAUUUAGAUU   1   ==|||||||||||=||||||* targets:1884   UGGCAUCCAUCUUGAAUCUAU   1904 Target Full Sequence	2.5	PREDICTED: Zea mays S-(+)-linalool synthase, chloroplastic-like (LOC103654934), transcript variant X2, mRNA	NA	coding protein	psRNATarget