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BaseInfo

ncRNA ID	novel_zma_miR4694
Species	Zea mays
Class	miRNA
Genome position	Chr8:155822606-155822733 [+]
Reference genome	RefGen_v4
Source	SRR2287162
Length	24
Mature sequence(if miRNA)	105 - UCCGACACAAACGAACAAGACCUA - 128
Stem-loop(if miRNA)	--  C      -    UC          --CAC       C   ACAG      --AAA    --A  U   GG CUUGUU GUUU  UGUCGGAUUG     UCGGAAU GUU    CUAACU     GUUU   UA A   || |||||| ||||  ||||||||||     ||||||| |||    ||||||     ||||   || A   CC GAACAA CAAA  ACAGCCUAAC     AGCCUUG UAA    GAUUGG     CAAA   AU A AU  A      G    -C          CACCC       C   ---G      CCUAA    GAG  U
Stem-loop sequence	GGCCUUGUUGUUUUCUGUCGGAUUGCACUCGGAAUCGUUACAGCUAACUAAAGUUUAUAUAAAUUAGAGAAACAAUCCGGUUAGGAAUCGUUCCGACCCACCAAUCCGACACAAACGAACAAGACCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ517098.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *||||||||||||||||||||||| targets:96   AAGGUCUUGUUCGUUUGUGUCGGA   119 Target Full Sequence	0.0	TSA: Zea mays cultivar W22 CL501Contig1.betc, mRNA sequence	NA	coding protein	psRNATarget
BT041125.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *||||||||||||||||||||||| targets:1260   GAGGUCUUGUUCGUUUGUGUCGGA   1283 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0177J19 mRNA, complete cds	NA	coding protein	psRNATarget
JB166422.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:8   UAGGCCUUGUUCGUUUGUGUCGGA   31 Target Full Sequence	0.0	Sequence 4086 from Patent EP2559767	NA	coding protein	psRNATarget
HI405961.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:8   UAGGCCUUGUUCGUUUGUGUCGGA   31 Target Full Sequence	0.0	Sequence 4086 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238091.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:8   UAGGCCUUGUUCGUUUGUGUCGGA   31 Target Full Sequence	0.0	Sequence 4086 from Patent EP2985353	NA	coding protein	psRNATarget
JB166389.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:9   UAGGCCUUGUUCGUUUGUGUCGGA   32 Target Full Sequence	0.0	Sequence 4053 from Patent EP2559767	NA	coding protein	psRNATarget
JB166395.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:9   UAGGCCUUGUUCGUUUGUGUCGGA   32 Target Full Sequence	0.0	Sequence 4059 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238064.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:9   UAGGCCUUGUUCGUUUGUGUCGGA   32 Target Full Sequence	0.0	Sequence 4059 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238061.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:9   UAGGCCUUGUUCGUUUGUGUCGGA   32 Target Full Sequence	0.0	Sequence 4056 from Patent EP2985353	NA	coding protein	psRNATarget
HI405934.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:9   UAGGCCUUGUUCGUUUGUGUCGGA   32 Target Full Sequence	0.0	Sequence 4059 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238058.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:9   UAGGCCUUGUUCGUUUGUGUCGGA   32 Target Full Sequence	0.0	Sequence 4053 from Patent EP2985353	NA	coding protein	psRNATarget
JB166392.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:9   UAGGCCUUGUUCGUUUGUGUCGGA   32 Target Full Sequence	0.0	Sequence 4056 from Patent EP2559767	NA	coding protein	psRNATarget
HI405931.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:9   UAGGCCUUGUUCGUUUGUGUCGGA   32 Target Full Sequence	0.0	Sequence 4056 from Patent EP2074227	NA	coding protein	psRNATarget
HI405928.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:9   UAGGCCUUGUUCGUUUGUGUCGGA   32 Target Full Sequence	0.0	Sequence 4053 from Patent EP2074227	NA	coding protein	psRNATarget
JB166366.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:10   UAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4030 from Patent EP2559767	NA	coding protein	psRNATarget
JB166391.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   |||||||||||||||||||*|||| targets:10   UAGGUCUUGUUCGUUUGUGCCGGA   33 Target Full Sequence	1.5	Sequence 4055 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238040.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:10   UAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4035 from Patent EP2985353	NA	coding protein	psRNATarget
HI405930.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   |||||||||||||||||||*|||| targets:10   UAGGUCUUGUUCGUUUGUGCCGGA   33 Target Full Sequence	1.5	Sequence 4055 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238060.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   |||||||||||||||||||*|||| targets:10   UAGGUCUUGUUCGUUUGUGCCGGA   33 Target Full Sequence	1.5	Sequence 4055 from Patent EP2985353	NA	coding protein	psRNATarget
HI405910.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:10   UAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4035 from Patent EP2074227	NA	coding protein	psRNATarget
JB166367.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:10   UAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4031 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238035.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:10   UAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4030 from Patent EP2985353	NA	coding protein	psRNATarget
HI405905.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:10   UAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4030 from Patent EP2074227	NA	coding protein	psRNATarget
JB166371.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:10   UAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4035 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238036.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:10   UAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4031 from Patent EP2985353	NA	coding protein	psRNATarget
HI405906.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:10   UAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4031 from Patent EP2074227	NA	coding protein	psRNATarget
HI407339.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||||||||||||||*||||||| targets:8   UAGGUCUUGUUCGUUUCUGUCGGA   31 Target Full Sequence	1.5	Sequence 5464 from Patent EP2074227	NA	coding protein	psRNATarget
JB167800.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||||||||||||||*||||||| targets:8   UAGGUCUUGUUCGUUUCUGUCGGA   31 Target Full Sequence	1.5	Sequence 5464 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239469.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||||||||||||||*||||||| targets:8   UAGGUCUUGUUCGUUUCUGUCGGA   31 Target Full Sequence	1.5	Sequence 5464 from Patent EP2985353	NA	coding protein	psRNATarget
FJ805752.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||||||*||||||||||||||| targets:1084   UAGGUCUUAUUCGUUUGUGUCGGA   1107 Target Full Sequence	1.0	Zea mays DRE-binding protein 4 (DBP4) mRNA, complete cds	NA	coding protein	psRNATarget
FJ805752.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||* targets:1025   UAGGCCUUGUUCGUUUGUGCCGGU   1048 Target Full Sequence	2.5	Zea mays DRE-binding protein 4 (DBP4) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001177010.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||||||*||||||||||||||| targets:1084   UAGGUCUUAUUCGUUUGUGUCGGA   1107 Target Full Sequence	1.0	Zea mays DRE-binding protein 4 (DBP4), mRNA	NA	coding protein	psRNATarget
NM_001177010.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||* targets:1025   UAGGCCUUGUUCGUUUGUGCCGGU   1048 Target Full Sequence	2.5	Zea mays DRE-binding protein 4 (DBP4), mRNA	NA	coding protein	psRNATarget
BT088026.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:1186   UAGGCCUUGUUCGUUUGUGUCGGA   1209 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0366I22 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196885.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:1186   UAGGCCUUGUUCGUUUGUGUCGGA   1209 Target Full Sequence	0.0	Zea mays Protein kinase superfamily protein (LOC100502407), mRNA	NA	coding protein	psRNATarget
XM_020549216.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   |||||||||||||||||||*|||| targets:137   UAGGUCUUGUUCGUUUGUGCCGGA   160 Target Full Sequence	1.5	PREDICTED: Zea mays putative disease resistance protein RGA4 (LOC103649444), mRNA	NA	coding protein	psRNATarget
BT068430.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:452   UAGGCCUUGUUCGUUUGUGUCGGA   475 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0175H08 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008676360.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:1820   UAGGGCUUGUUCGUUUGUGUCGGA   1843 Target Full Sequence	0.0	PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008676377.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:1894   UAGGGCUUGUUCGUUUGUGUCGGA   1917 Target Full Sequence	0.0	PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008676366.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:1912   UAGGGCUUGUUCGUUUGUGUCGGA   1935 Target Full Sequence	0.0	PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008676374.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:1988   UAGGGCUUGUUCGUUUGUGUCGGA   2011 Target Full Sequence	0.0	PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020539404.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:3424   UAGGCCUUGUUCGUUUGUGUCGGA   3447 Target Full Sequence	0.0	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020539406.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:3442   UAGGCCUUGUUCGUUUGUGUCGGA   3465 Target Full Sequence	0.0	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020539386.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:3459   UAGGCCUUGUUCGUUUGUGUCGGA   3482 Target Full Sequence	0.0	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020539392.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:3477   UAGGCCUUGUUCGUUUGUGUCGGA   3500 Target Full Sequence	0.0	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020539417.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||||| targets:3727   UAGGCCUUGUUCGUUUGUGUCGGA   3750 Target Full Sequence	0.0	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X9, mRNA	NA	coding protein	psRNATarget
XM_020550140.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   |||||||||||||||||||*|||| targets:3428   UAGGUCUUGUUCGUUUGUGCCGGA   3451 Target Full Sequence	1.5	PREDICTED: Zea mays rust resistance kinase Lr10 (LOC103649884), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008675573.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   |||||||||||||||||||*|||| targets:3428   UAGGUCUUGUUCGUUUGUGCCGGA   3451 Target Full Sequence	1.5	PREDICTED: Zea mays rust resistance kinase Lr10 (LOC103649884), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT083852.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   |=||*||||||||||||||||||| targets:352   UGGGACUUGUUCGUUUGUGUCGGA   375 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0047A08 mRNA, complete cds	NA	coding protein	psRNATarget
HI405951.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *||||||||||||||||||*|||| targets:6   AAGGUCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4076 from Patent EP2074227	NA	coding protein	psRNATarget
JB166412.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *||||||||||||||||||*|||| targets:6   AAGGUCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4076 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238081.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *||||||||||||||||||*|||| targets:6   AAGGUCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4076 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238037.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||||||| targets:10   AAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4032 from Patent EP2985353	NA	coding protein	psRNATarget
HI405907.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||||||| targets:10   AAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4032 from Patent EP2074227	NA	coding protein	psRNATarget
HI405914.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||||||| targets:10   AAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4039 from Patent EP2074227	NA	coding protein	psRNATarget
JB166375.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||||||| targets:10   AAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4039 from Patent EP2559767	NA	coding protein	psRNATarget
JB166368.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||||||| targets:10   AAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4032 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238044.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||||||| targets:10   AAGGCCUUGUUCGUUUGUGUCGGA   33 Target Full Sequence	0.0	Sequence 4039 from Patent EP2985353	NA	coding protein	psRNATarget
EZ056395.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||||||| targets:33   AAGGCCUUGUUCGUUUGUGUCGGA   56 Target Full Sequence	0.0	TSA: Zea mays contig57517, mRNA sequence	NA	coding protein	psRNATarget
AY105834.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||||||| targets:754   AAGGCCUUGUUCGUUUGUGUCGGA   777 Target Full Sequence	0.0	Zea mays PCO093864 mRNA sequence	NA	coding protein	psRNATarget
XM_008673797.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||||||| targets:836   AAGGCCUUGUUCGUUUGUGUCGGA   859 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100278465 (LOC100278465), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT017671.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *||||||||||||||||||*|||| targets:868   AAGGUCUUGUUCGUUUGUGCCGGA   891 Target Full Sequence	1.5	Zea mays clone EL01N0442B02.c mRNA sequence	NA	coding protein	psRNATarget
NM_001111367.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||||||| targets:1092   AAGGCCUUGUUCGUUUGUGUCGGA   1115 Target Full Sequence	0.0	Zea mays Ferredoxin-6, chloroplastic (pco072676(750)), mRNA	NA	coding protein	psRNATarget
BT019200.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||||||| targets:940   AAGGCCUUGUUCGUUUGUGUCGGA   963 Target Full Sequence	0.0	Zea mays clone Contig873.F mRNA sequence	NA	coding protein	psRNATarget
XM_008647453.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||||||| targets:3269   AAGGCCUUGUUCGUUUGUGUCGGA   3292 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103627145 (LOC103627145), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008647452.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||||||| targets:3257   AAGGCCUUGUUCGUUUGUGUCGGA   3280 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103627145 (LOC103627145), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020538731.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||||||| targets:5237   AAGGCCUUGUUCGUUUGUGUCGGA   5260 Target Full Sequence	0.0	PREDICTED: Zea mays UDP-glucose:glycoprotein glucosyltransferase (LOC103627875), mRNA	NA	coding protein	psRNATarget
LQ238069.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||| targets:6   UAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4064 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238075.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||| targets:6   UAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4070 from Patent EP2985353	NA	coding protein	psRNATarget
HI405945.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||| targets:6   UAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4070 from Patent EP2074227	NA	coding protein	psRNATarget
JB166406.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||| targets:6   UAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4070 from Patent EP2559767	NA	coding protein	psRNATarget
HI405940.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||| targets:6   UAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4065 from Patent EP2074227	NA	coding protein	psRNATarget
JB166401.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||| targets:6   UAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4065 from Patent EP2559767	NA	coding protein	psRNATarget
JB166400.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||| targets:6   UAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4064 from Patent EP2559767	NA	coding protein	psRNATarget
HI405939.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||| targets:6   UAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4064 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238070.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||| targets:6   UAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4065 from Patent EP2985353	NA	coding protein	psRNATarget
HI405804.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||| targets:10   UAGGCCUUGUUCGUUUGUGCCGGA   33 Target Full Sequence	1.5	Sequence 3929 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237934.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||| targets:10   UAGGCCUUGUUCGUUUGUGCCGGA   33 Target Full Sequence	1.5	Sequence 3929 from Patent EP2985353	NA	coding protein	psRNATarget
JB166265.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||| targets:10   UAGGCCUUGUUCGUUUGUGCCGGA   33 Target Full Sequence	1.5	Sequence 3929 from Patent EP2559767	NA	coding protein	psRNATarget
EZ050562.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||*|||||| targets:46   UAGGGCUUGUUCGUUUGCGUCGGA   69 Target Full Sequence	1.5	TSA: Zea mays contig51682, mRNA sequence	NA	coding protein	psRNATarget
EU942882.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||| targets:70   UAGGCCUUGUUCGUUUGUGCCGGA   93 Target Full Sequence	1.5	Zea mays clone 1543225 mRNA sequence	NA	coding protein	psRNATarget
EU941248.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*|||||||||||*||||||| targets:113   UAGGCCUUGUUCGUUUCUGUCGGA   136 Target Full Sequence	1.5	Zea mays clone 1431203 mRNA sequence	NA	coding protein	psRNATarget
EU953779.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||*|||| targets:619   UAGGCCUUGUUCGUUUGUGCCGGA   642 Target Full Sequence	1.5	Zea mays clone 1445891 mRNA sequence	NA	coding protein	psRNATarget
BT063869.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*|||||||||||||*||||| targets:821   UAGGCCUUGUUCGUUUGUAUCGGA   844 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0114G15 mRNA, complete cds	NA	coding protein	psRNATarget
JB166331.1	ncRNA:22   CCAGAACAAGCAAACACAGCCU   1   ||*||||||||||||||||||| targets:1   GGCCUUGUUCGUUUGUGUCGGA   22 Target Full Sequence	0.0	Sequence 3995 from Patent EP2559767	NA	coding protein	psRNATarget
HI405870.1	ncRNA:22   CCAGAACAAGCAAACACAGCCU   1   ||*||||||||||||||||||| targets:1   GGCCUUGUUCGUUUGUGUCGGA   22 Target Full Sequence	0.0	Sequence 3995 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238000.1	ncRNA:22   CCAGAACAAGCAAACACAGCCU   1   ||*||||||||||||||||||| targets:1   GGCCUUGUUCGUUUGUGUCGGA   22 Target Full Sequence	0.0	Sequence 3995 from Patent EP2985353	NA	coding protein	psRNATarget
XM_020538654.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||*|||||| targets:762   UAGGCCUUGUUCGUUUGCGUCGGA   785 Target Full Sequence	1.5	PREDICTED: Zea mays polyamine transporter PUT1 (LOC103643034), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001175834.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*|||||||||||||*||||| targets:851   UAGGCCUUGUUCGUUUGUAUCGGA   874 Target Full Sequence	1.5	Zea mays 14-dihydroxy-2-naphthoyl-CoA thioesterase 1 (LOC100383169), mRNA	NA	coding protein	psRNATarget
BT066445.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*|||||||||||||*||||| targets:851   UAGGCCUUGUUCGUUUGUAUCGGA   874 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0173D16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020540976.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*|||||||||||*||||||| targets:4411   UAGGCCUUGUUCGUUUCUGUCGGA   4434 Target Full Sequence	1.5	PREDICTED: Zea mays indole-3-acetaldehyde oxidase-like (LOC103631977), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ060491.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*=|||||||||||*|||||| targets:123   UAGGCUUUGUUCGUUUGCGUCGGA   146 Target Full Sequence	2.5	TSA: Zea mays contig61613, mRNA sequence	NA	coding protein	psRNATarget
EZ061700.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*=|||||||||||||*|||| targets:87   UAGGCUUUGUUCGUUUGUGCCGGA   110 Target Full Sequence	2.5	TSA: Zea mays contig62822, mRNA sequence	NA	coding protein	psRNATarget
AY107839.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||-||||||||||||||*|||| targets:1176   UAGG-CUUGUUCGUUUGUGCCGGA   1198 Target Full Sequence	1.5	Zea mays PCO143146 mRNA sequence	NA	coding protein	psRNATarget
BT054540.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*|||*|||||||||||=||| targets:1738   UAGGCCUUUUUCGUUUGUGUUGGA   1761 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0148H17 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020547654.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   |||**=|||||||||||||||||| targets:4338   UAGACUUUGUUCGUUUGUGUCGGA   4361 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100279517 (LOC100279517), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB166397.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:6   AAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4061 from Patent EP2559767	NA	coding protein	psRNATarget
HI405936.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:6   AAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4061 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238066.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:6   AAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4061 from Patent EP2985353	NA	coding protein	psRNATarget
JB166393.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:9   AAGGGCUUGUUCGUUUGUGCCGGA   32 Target Full Sequence	1.5	Sequence 4057 from Patent EP2559767	NA	coding protein	psRNATarget
HI405932.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:9   AAGGGCUUGUUCGUUUGUGCCGGA   32 Target Full Sequence	1.5	Sequence 4057 from Patent EP2074227	NA	coding protein	psRNATarget
JB166394.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:9   AAGGCCUUGUUCGUUUGUGCCGGA   32 Target Full Sequence	1.5	Sequence 4058 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238063.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:9   AAGGCCUUGUUCGUUUGUGCCGGA   32 Target Full Sequence	1.5	Sequence 4058 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238062.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:9   AAGGGCUUGUUCGUUUGUGCCGGA   32 Target Full Sequence	1.5	Sequence 4057 from Patent EP2985353	NA	coding protein	psRNATarget
HI405933.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:9   AAGGCCUUGUUCGUUUGUGCCGGA   32 Target Full Sequence	1.5	Sequence 4058 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239368.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:10   AAGGGCUUGUUCGUUUGUGCCGGA   33 Target Full Sequence	1.5	Sequence 5363 from Patent EP2985353	NA	coding protein	psRNATarget
JB167699.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:10   AAGGGCUUGUUCGUUUGUGCCGGA   33 Target Full Sequence	1.5	Sequence 5363 from Patent EP2559767	NA	coding protein	psRNATarget
HI407238.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:10   AAGGGCUUGUUCGUUUGUGCCGGA   33 Target Full Sequence	1.5	Sequence 5363 from Patent EP2074227	NA	coding protein	psRNATarget
JB166409.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:6   AAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4073 from Patent EP2559767	NA	coding protein	psRNATarget
HI405948.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:6   AAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4073 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238078.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:6   AAGGCCUUGUUCGUUUGUGCCGGA   29 Target Full Sequence	1.5	Sequence 4073 from Patent EP2985353	NA	coding protein	psRNATarget
JB166384.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*|||||||||||*||||||| targets:237   AAGGCCUUGUUCGUUUCUGUCGGA   260 Target Full Sequence	1.5	Sequence 4048 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238053.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*|||||||||||*||||||| targets:237   AAGGCCUUGUUCGUUUCUGUCGGA   260 Target Full Sequence	1.5	Sequence 4048 from Patent EP2985353	NA	coding protein	psRNATarget
HI405923.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*|||||||||||*||||||| targets:237   AAGGCCUUGUUCGUUUCUGUCGGA   260 Target Full Sequence	1.5	Sequence 4048 from Patent EP2074227	NA	coding protein	psRNATarget
EZ063705.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||*|||||| targets:246   AAGGCCUUGUUCGUUUGCGUCGGA   269 Target Full Sequence	1.5	TSA: Zea mays contig64827, mRNA sequence	NA	coding protein	psRNATarget
EZ109082.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:13   AAGGCCUUGUUCGUUUGUGCCGGA   36 Target Full Sequence	1.5	TSA: Zea mays contig44741, mRNA sequence	NA	coding protein	psRNATarget
BT055357.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||*|* targets:328   UAGGGCUUGUUCGUUUGUGUCUGU   351 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0070A22 mRNA, complete cds	NA	coding protein	psRNATarget
BT017425.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*|||||||||||||*||||| targets:756   AAGGCCUUGUUCGUUUGUAUCGGA   779 Target Full Sequence	1.5	Zea mays clone EL01N0402H01.c mRNA sequence	NA	coding protein	psRNATarget
AY103783.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||||*||||||||||||||||*|* targets:688   UAGGGCUUGUUCGUUUGUGUCUGU   711 Target Full Sequence	2.5	Zea mays PCO084580 mRNA sequence	NA	coding protein	psRNATarget
AY107168.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:856   GAGGCCUUGUUCGUUUGUGCCGGA   879 Target Full Sequence	1.5	Zea mays PCO087750 mRNA sequence	NA	coding protein	psRNATarget
EU965080.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*|||||||||||*||||||| targets:1535   AAGGCCUUGUUCGUUUCUGUCGGA   1558 Target Full Sequence	1.5	Zea mays clone 283644 mRNA sequence	NA	coding protein	psRNATarget
NM_001138362.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:1417   AAGGCCUUGUUCGUUUGUGCCGGA   1440 Target Full Sequence	1.5	Zea mays Enhanced ethylene response protein 5 (LOC100193209), mRNA	NA	coding protein	psRNATarget
BT035415.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:1417   AAGGCCUUGUUCGUUUGUGCCGGA   1440 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0059N16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020538690.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*||||||||||||||*|||| targets:4117   AAGGCCUUGUUCGUUUGUGCCGGA   4140 Target Full Sequence	1.5	PREDICTED: Zea mays kinesin-like protein KIN-4C (LOC103627710), mRNA	NA	coding protein	psRNATarget
HI405935.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||***||||||||||||||||||| targets:5   UAAACCUUGUUCGUUUGUGUCGGA   28 Target Full Sequence	0.0	Sequence 4060 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238065.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||***||||||||||||||||||| targets:5   UAAACCUUGUUCGUUUGUGUCGGA   28 Target Full Sequence	0.0	Sequence 4060 from Patent EP2985353	NA	coding protein	psRNATarget
JB166396.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||***||||||||||||||||||| targets:5   UAAACCUUGUUCGUUUGUGUCGGA   28 Target Full Sequence	0.0	Sequence 4060 from Patent EP2559767	NA	coding protein	psRNATarget
EU952826.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*=|||||||||||*|||||| targets:646   AAGGCUUUGUUCGUUUGCGUCGGA   669 Target Full Sequence	2.5	Zea mays clone 1290653 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT062764.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*|*|||||||||||||=||| targets:909   AAGGGCAUGUUCGUUUGUGUUGGA   932 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0343N04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174739.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *|||*|*|||||||||||||=||| targets:909   AAGGGCAUGUUCGUUUGUGUUGGA   932 Target Full Sequence	2.5	Zea mays uncharacterized LOC100381966 (LOC100381966), mRNA	NA	coding protein	psRNATarget
LQ238067.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||*|||*|*||||||||||||||| targets:1   UAAGUCGUUUUCGUUUGUGUCGGA   24 Target Full Sequence	2.0	Sequence 4062 from Patent EP2985353	NA	coding protein	psRNATarget
JB166398.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||*|||*|*||||||||||||||| targets:1   UAAGUCGUUUUCGUUUGUGUCGGA   24 Target Full Sequence	2.0	Sequence 4062 from Patent EP2559767	NA	coding protein	psRNATarget
HI405937.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   ||*|||*|*||||||||||||||| targets:1   UAAGUCGUUUUCGUUUGUGUCGGA   24 Target Full Sequence	2.0	Sequence 4062 from Patent EP2074227	NA	coding protein	psRNATarget
XM_020548712.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *||**||||||||||||||*|||| targets:2054   AAGACCUUGUUCGUUUGUGCCGGA   2077 Target Full Sequence	1.5	PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008672661.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *||**||||||||||||||*|||| targets:2136   AAGACCUUGUUCGUUUGUGCCGGA   2159 Target Full Sequence	1.5	PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020548713.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *||**||||||||||||||*|||| targets:2149   AAGACCUUGUUCGUUUGUGCCGGA   2172 Target Full Sequence	1.5	PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008672662.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *||**||||||||||||||*|||| targets:2178   AAGACCUUGUUCGUUUGUGCCGGA   2201 Target Full Sequence	1.5	PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_008672660.2	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *||**||||||||||||||*|||| targets:2210   AAGACCUUGUUCGUUUGUGCCGGA   2233 Target Full Sequence	1.5	PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020548714.1	ncRNA:24   AUCCAGAACAAGCAAACACAGCCU   1   *||**||||||||||||||*|||| targets:2259   AAGACCUUGUUCGUUUGUGCCGGA   2282 Target Full Sequence	1.5	PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X5, mRNA	NA	coding protein	psRNATarget