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BaseInfo

ncRNA ID novel_zma_miR4692
Species Zea mays
Class miRNA
Genome position Chr8:132504451-132504581 [+]
Reference genome RefGen_v4
Source SRR2287162;SRR2287163
Length 24
Mature sequence(if miRNA) 1 - CCUGGUGCGGCUGAACCGGAUGGC - 24
Stem-loop(if miRNA) --      GC    G             CGU  A         CCAAAUAUACAAAC    UAUAUAUAUAU
  CCUGGU  GGCU AACCGGAUGGCAC   UG GCCAGGGCU              UAUA           A
  ||||||  |||| |||||||||||||   || |||||||||              ||||           U
  GGACCA  CCGA UUGGUCUACUGUG   AC CGGUCCCGA              AGAG           U
CU      GA    G             CAU  -         -------------A    AUCAAUAACCU
Stem-loop sequence CCUGGUGCGGCUGAACCGGAUGGCACCGUUGAGCCAGGGCUCCAAAUAUACAAACUAUAUAUAUAUAUAUAUUUCCAAUAACUAGAGAAAGCCCUGGCCAUACGUGUCAUCUGGUUGAGCCAGACCAGGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020544200.1
ncRNA:24   CGGUAGGCCAAGUCGGCGUGGUCC   1
  |||||||||||=||||||||||||
targets:574   GCCAUCCGGUUUAGCCGCACCAGG   597

1.5 PREDICTED: Zea mays uncharacterized LOC109942302 (LOC109942302), mRNA NA coding protein psRNATarget