ncRNA ID | novel_zma_miR4692 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:132504451-132504581 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287162;SRR2287163 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCUGGUGCGGCUGAACCGGAUGGC - 24 |
Stem-loop(if miRNA) |
--      GC    G             CGU  A         CCAAAUAUACAAAC    UAUAUAUAUAU   CCUGGU  GGCU AACCGGAUGGCAC   UG GCCAGGGCU              UAUA           A   ||||||  |||| |||||||||||||   || |||||||||              ||||           U   GGACCA  CCGA UUGGUCUACUGUG   AC CGGUCCCGA              AGAG           U CU      GA    G             CAU  -         -------------A    AUCAAUAACCU |
Stem-loop sequence | CCUGGUGCGGCUGAACCGGAUGGCACCGUUGAGCCAGGGCUCCAAAUAUACAAACUAUAUAUAUAUAUAUAUUUCCAAUAACUAGAGAAAGCCCUGGCCAUACGUGUCAUCUGGUUGAGCCAGACCAGGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020544200.1 |
|
1.5 | PREDICTED: Zea mays uncharacterized LOC109942302 (LOC109942302), mRNA | NA | coding protein | psRNATarget |