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BaseInfo

ncRNA ID	osa-miRf10066-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - UCCCGGUUGGUAAUACCAACCGG - NA
Stem-loop(if miRNA)	G            U  A     GAUUGAUC CUUUAGUCCCGGUUGGUG UACCAACCGGGA UA AGAUC        U |||||||||||||||||| |||||||||||| || ||||| GAAAUUAGGGCCAACCAU AUGGUUGGCCCU AU UCUAG        A                   A            C  A     GCCCUCAU
Stem-loop sequence	CUUUAGUCCCGGUUGGUGGUACCAACCGGGAUUAAAGAUCGAUUGAUCUAUACUCCCGGAUCUAUACUCCCGGUUGGUAAUACCAACCGGGAUUAAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289098.1	ncRNA:23   GGCCAACCAUAAUGGUUGGCCCU   1   |||||||||=||||||||||||| targets:158   CCGGUUGGUGUUACCAACCGGGA   180 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:23   GGCCAACCAUAAUGGUUGGCCCU   1   |||||||||*||||||||||||| targets:115   CCGGUUGGUUUUACCAACCGGGA   137 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:23   GGCCAACCAUAAUGGUUGGCCCU   1   ||||||||||*|||||||||||| targets:1380   CCGGUUGGUAAUACCAACCGGGA   1402 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:23   GGCCAACCAUAAUGGUUGGCCCU   1   ||||||*||=||||||||||||| targets:2392   CCGGUUAGUGUUACCAACCGGGA   2414 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
HI404518.1	ncRNA:23   GGCCAACCAUAAUGGUUGGCCCU   1   |||||||||=*|||||||||||| targets:54   CCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	2.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
JB164979.1	ncRNA:23   GGCCAACCAUAAUGGUUGGCCCU   1   |||||||||=*|||||||||||| targets:54   CCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	2.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:23   GGCCAACCAUAAUGGUUGGCCCU   1   |||||||||=*|||||||||||| targets:54   CCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	2.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:23   GGCCAACCAUAAUGGUUGGCCCU   1   ||||||*||=||||||||||||| targets:917   CCGGUUUGUGUUACCAACCGGGA   939 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK288377.1	ncRNA:23   GGCCAACCAUAAUGGUUGGCCCU   1   |||||||||=|||||||||*||| targets:1387   CCGGUUGGUGUUACCAACCUGGA   1409 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:23   GGCCAACCAUAAUGGUUGGCCCU   1   |||||||||=|||||||||||*| targets:1841   CCGGUUGGUGUUACCAACCGGAA   1863 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:23   GGCCAACCAUAAUGGUUGGCCCU   1   ||*||||||=||||||||||||| targets:2399   CCCGUUGGUGUUACCAACCGGGA   2421 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
AK061057.1	ncRNA:23   GGCCAACCAUAAUGGUUGGCCCU   1   ==||||||||*|||||||||||| targets:364   UUGGUUGGUAAUACCAACCGGGA   386 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence	NA	coding protein	psRNATarget
XM_015755256.1	ncRNA:23   GGCCAACCAUAAUGGUUGGCCCU   1   ||****|||=||||||||||||| targets:62   CCAUCCGGUGUUACCAACCGGGA   84 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346665 (LOC4346665), transcript variant X2, mRNA	uncharacterized LOC4346665(LOC4346665)	coding protein	psRNATarget