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BaseInfo

ncRNA ID	osa-miRf10065-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CUGGUGCAGGAUGGCGCCGAUGC - NA
Stem-loop(if miRNA)	-   C  A      ACCG       G  AC  A  ---A       C  GUACA    GA   -   CA   C GC CCG CA UGGUGC    CCUGCAC AG  CG UG    GCUCGCG UC     CGGC  GCC CUG  UGU A || ||| || ||||||    ||||||| ||  || ||    ||||||| ||     ||||  ||| |||  ||| CG GGC GU GCCGCG    GGACGUG UC  GC GC    CGAGCGC AG     GUCG  CGG GAC  GCG C   A   C  A      -GUA       G  CC  A  CCGG       A  ---AA    GC   C   -C   G
Stem-loop sequence	GCCCGCCAAUGGUGCACCGCCUGCACGAGACCGAUGAGCUCGCGCUCGUACACGGCGAGCCCUGCAUGUCACGGCGCCAGCGGCCGGCUGAAGAACGCGAGCGGCCCGACGCCCUGGUGCAGGAUGGCGCCGAUGCCGGAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK241157.1	ncRNA:23   CGUAGCCGCGGUAGGACGUGGUC   1   *|=||||||||||||*||||||| targets:790   UCGUCGGCGCCAUCCCGCACCAG   812 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065114J03, full insert sequence	NA	coding protein	psRNATarget
XM_015758652.1	ncRNA:23   CGUAGCCGCGGUAGGACGUGGUC   1   *|=||||||||||||*||||||| targets:525   UCGUCGGCGCCAUCCCGCACCAG   547 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase At4g08850 (LOC4348855), mRNA	probable LRR receptor-like serine/threonine-protein kinase At4g08850(LOC4348855)	coding protein	psRNATarget
AK120876.1	ncRNA:23   CGUAGCCGCGGUAGGACGUGGUC   1   *|=||||||||||||*||||||| targets:526   UCGUCGGCGCCAUCCCGCACCAG   548 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023027F13, full insert sequence	NA	coding protein	psRNATarget
XM_015759357.1	ncRNA:23   CGUAGCCGCGGUAGGACGUGGUC   1   *|=||||||||||||*||||||| targets:772   UCGUCGGCGCCAUCCCGCACCAG   794 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group LRR receptor-like serine/threonine-protein kinase GSO1 (LOC4348862), mRNA	LRR receptor-like serine/threonine-protein kinase GSO1(LOC4348862)	coding protein	psRNATarget
XM_015757957.1	ncRNA:23   CGUAGCCGCGGUAGGACGUGGUC   1   *|=||||||||||||*||||||| targets:528   UCGUCGGCGCCAUCCCGCACCAG   550 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group leucine-rich repeat receptor protein kinase EMS1 (LOC4349186), mRNA	leucine-rich repeat receptor protein kinase EMS1(LOC4349186)	coding protein	psRNATarget
AK110508.1	ncRNA:23   CGUAGCCGCGGUAGGACGUGGUC   1   *|=||||||||||||*||||||| targets:500   UCGUCGGCGCCAUCCCGCACCAG   522 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-167-F10, full insert sequence	NA	coding protein	psRNATarget
XM_015758966.1	ncRNA:23   CGUAGCCGCGGUAGGACGUGGUC   1   *|=|=||||||||||*||||||| targets:533   UCGUUGGCGCCAUCCCGCACCAG   555 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable leucine-rich repeat receptor-like protein kinase At1g35710 (LOC107275831), mRNA	probable leucine-rich repeat receptor-like protein kinase At1g35710(LOC107275831)	coding protein	psRNATarget