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BaseInfo

ncRNA ID novel_zma_miR4667
Species Zea mays
Class miRNA
Genome position Chr7:6161753-6161879 [+]
Reference genome RefGen_v4
Source SRR2287162;SRR1997865;SRR5451003;SRR2089699;SRR2089704;SRR2089706;SRR2089707
Length 24
Mature sequence(if miRNA) 104 - ACCUAGAACACUCGGCAAAGGCGU - 127
Stem-loop(if miRNA) --C             CAGG    UA                  AAC      -         AUU
   CCUUUGUCGAGUG    CUGG  GACACUCGGCAAAUAGGU   AUCUUU GCCGAGUGU   A
   |||||||||||||    ||||  ||||||||||||||||||   |||||| |||||||||
   GGAAACGGCUCAC    GAUC  CUGUGAGCCGUUUAUUUA   UAGAAA CGGCUCACA   G
UGC             --AA    CA                  --A      U         GUG
Stem-loop sequence CCCUUUGUCGAGUGCAGGCUGGUAGACACUCGGCAAAUAGGUAACAUCUUUGCCGAGUGUAUUAGGUGACACUCGGCUAAAGAUAAUUUAUUUGCCGAGUGUCACCUAGAACACUCGGCAAAGGCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU974507.1
ncRNA:24   UGC----GGAAACGGCUCACAAGAUCCA   1
  |||----|=|||||||||||||||||||
targets:524   ACGGUGACUUUUGCCGAGUGUUCUAGGU   551

0.0 Zea mays clone 451014 hypothetical protein mRNA, complete cds NA coding protein psRNATarget