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BaseInfo

ncRNA ID	novel_zma_miR4664
Species	Zea mays
Class	miRNA
Genome position	Chr10:71471358-71471480 [+]
Reference genome	RefGen_v4
Source	SRR1618882;SRR3341905;SRR5100248
Length	24
Mature sequence(if miRNA)	1 - UUUUCCUGUGUAGAACCCUAUAUU - 24
Stem-loop(if miRNA)	--              A                                        A      UUUUCCUGUGUAGA CCCUAUAUUUCGAUUUGAGGCAUUAGUUUGAGGCAUUGUU GAGC   |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||A   AAAAGGACACAUCU GGGAUAUAAAGCUAAACUCCGUAAUCAAACUCCGUAACAA CUCU CA              C                                        C
Stem-loop sequence	UUUUCCUGUGUAGAACCCUAUAUUUCGAUUUGAGGCAUUAGUUUGAGGCAUUGUUAGAGCAUCUCCAACAAUGCCUCAAACUAAUGCCUCAAAUCGAAAUAUAGGGCUCUACACAGGAAAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY106673.1	ncRNA:24   UUAUAUCCCAAGAUGUGUCCUUUU   1   |||||||||*|||||||||||||| targets:1341   AAUAUAGGGCUCUACACAGGAAAA   1364 Target Full Sequence	1.0	Zea mays PCO111223 mRNA sequence	NA	coding protein	psRNATarget
BT061162.2	ncRNA:24   UUAUAUCCCAAGAUGUGUCCUUUU   1   |||||=|||*|||||||||||||| targets:1508   AAUAUGGGGCUCUACACAGGAAAA   1531 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0117D02 mRNA, complete cds	NA	coding protein	psRNATarget
EU952101.1	ncRNA:24   UUAUAUCCCAAGAUGUGUCCUUUU   1   |||||=*||*|||||||||||||| targets:65   AAUAUGAGGCUCUACACAGGAAAA   88 Target Full Sequence	3.0	Zea mays clone 1164740 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
JB163409.1	ncRNA:19   UCCCAAGAUGUGUCCUUUU   1   ||||*|=|||||||||||| targets:1   AGGGCUUUACACAGGAAAA   19 Target Full Sequence	2.5	Sequence 1073 from Patent EP2559767	NA	coding protein	psRNATarget
HI402948.1	ncRNA:19   UCCCAAGAUGUGUCCUUUU   1   ||||*|=|||||||||||| targets:1   AGGGCUUUACACAGGAAAA   19 Target Full Sequence	2.5	Sequence 1073 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235078.1	ncRNA:19   UCCCAAGAUGUGUCCUUUU   1   ||||*|=|||||||||||| targets:1   AGGGCUUUACACAGGAAAA   19 Target Full Sequence	2.5	Sequence 1073 from Patent EP2985353	NA	coding protein	psRNATarget