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BaseInfo

ncRNA ID	novel_zma_miR4660
Species	Zea mays
Class	miRNA
Genome position	Chr7:96921487-96921566 [-]
Reference genome	RefGen_v4
Source	SRR2287162
Length	24
Mature sequence(if miRNA)	57 - GAUCCCGAGAGGAUUGAAGGGGAU - 80
Stem-loop(if miRNA)	--      G      -   A         U         AA   GAUCCC AGAGGA UUG AGGGGAUUG GGGGGAAAU  A   |||||| |||||| ||| ||||||||| |||||||||   CUAGGG UCUCCU AAC UUUCCUAAC UCUCUUUUA  C CC      -      U   C         U         AU
Stem-loop sequence	GAUCCCGAGAGGAUUGAAGGGGAUUGUGGGGGAAAUAAACUAAUUUUCUCUUCAAUCCUUUCCAAUUCCUCUGGGAUCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI409663.1	ncRNA:24   UAGGGGAAGUUAGGAGAGCCCUAG   1   ||||||||||||||||*||||||| targets:76   AUCCCCUUCAAUCCUCCCGGGAUC   99 Target Full Sequence	1.5	Sequence 7788 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241793.1	ncRNA:24   UAGGGGAAGUUAGGAGAGCCCUAG   1   ||||||||||||||||*||||||| targets:76   AUCCCCUUCAAUCCUCCCGGGAUC   99 Target Full Sequence	1.5	Sequence 7788 from Patent EP2985353	NA	coding protein	psRNATarget
JB170124.1	ncRNA:24   UAGGGGAAGUUAGGAGAGCCCUAG   1   ||||||||||||||||*||||||| targets:76   AUCCCCUUCAAUCCUCCCGGGAUC   99 Target Full Sequence	1.5	Sequence 7788 from Patent EP2559767	NA	coding protein	psRNATarget
EZ098881.1	ncRNA:24   UAGGGGAAGUUAGGAGAGCCCUAG   1   |||||||*|||||||||||||||| targets:86   AUCCCCUCCAAUCCUCUCGGGAUC   109 Target Full Sequence	1.0	TSA: Zea mays contig34536, mRNA sequence	NA	coding protein	psRNATarget
EU961132.1	ncRNA:24   UAGGGGAAGUUAGGAGAGCCCUAG   1   ||||||||||||||||*||||||| targets:830   AUCCCCUUCAAUCCUCCCGGGAUC   853 Target Full Sequence	1.5	Zea mays clone 232865 phospholipid hydroperoxide glutathione peroxidase mRNA, complete cds	NA	coding protein	psRNATarget
BT040716.2	ncRNA:24   UAGGGGAAGUUAGGAGAGCCCUAG   1   ||||||||||||||||*||||||| targets:869   AUCCCCUUCAAUCCUCCCGGGAUC   892 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0120F10 mRNA, complete cds	NA	coding protein	psRNATarget
BT066291.1	ncRNA:24   UAGGGGAAGUUAGGAGAGCCCUAG   1   ||||||||||||||||*||||||| targets:874   AUCCCCUUCAAUCCUCCCGGGAUC   897 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0176M03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147738.1	ncRNA:24   UAGGGGAAGUUAGGAGAGCCCUAG   1   ||||||||||||||||*||||||| targets:874   AUCCCCUUCAAUCCUCCCGGGAUC   897 Target Full Sequence	1.5	Zea mays putative glutathione peroxidase (LOC100273297), mRNA	NA	coding protein	psRNATarget