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BaseInfo

ncRNA ID	novel_zma_miR4658
Species	Zea mays
Class	miRNA
Genome position	Chr2:106619291-106619406 [-]
Reference genome	RefGen_v4
Source	SRR1618882;SRR5105961
Length	24
Mature sequence(if miRNA)	93 - AGCCGUCGGACAUAAGAUUAUGUC - 116
Stem-loop(if miRNA)	--A               A                A           AUCA      A    GCCGUCGGACAUAAG UUAUGUCUGAUGGCCU CUCUGACGGCC    GAUAUA G    ||||||||||||||| |||||||||||||||| |||||||||||    ||||||    CGGCAGCUUGUAUUC AAUAUAGGCUACCGGA GAGACUGCCGG    CUGUAU C CGC               G                C           CAUC      U
Stem-loop sequence	AGCCGUCGGACAUAAGAUUAUGUCUGAUGGCCUACUCUGACGGCCAUCAGAUAUAAGCUUAUGUCCUACGGCCGUCAGAGCAGGCCAUCGGAUAUAAGCUUAUGUUCGACGGCCGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI406959.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   |||||||*|||||||||*|||||| targets:9   GACAUAAGCUUAUGUCCAACGGCU   32 Target Full Sequence	2.5	Sequence 5084 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239089.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   |||||||*|||||||||*|||||| targets:9   GACAUAAGCUUAUGUCCAACGGCU   32 Target Full Sequence	2.5	Sequence 5084 from Patent EP2985353	NA	coding protein	psRNATarget
JB167420.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   |||||||*|||||||||*|||||| targets:9   GACAUAAGCUUAUGUCCAACGGCU   32 Target Full Sequence	2.5	Sequence 5084 from Patent EP2559767	NA	coding protein	psRNATarget
JB167399.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   *||||||*|||||||||*|||||| targets:59   AACAUAAGCUUAUGUCCAACGGCU   82 Target Full Sequence	2.5	Sequence 5063 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239068.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   *||||||*|||||||||*|||||| targets:59   AACAUAAGCUUAUGUCCAACGGCU   82 Target Full Sequence	2.5	Sequence 5063 from Patent EP2985353	NA	coding protein	psRNATarget
HI406938.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   *||||||*|||||||||*|||||| targets:59   AACAUAAGCUUAUGUCCAACGGCU   82 Target Full Sequence	2.5	Sequence 5063 from Patent EP2074227	NA	coding protein	psRNATarget
EU944465.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   *||||||*|||||||||*|||||| targets:187   AACAUAAGCUUAUGUCCAACGGCU   210 Target Full Sequence	2.5	Zea mays clone 219525 mRNA sequence	NA	coding protein	psRNATarget
JB166317.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   ||*||||**||||||||||||||* targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33 Target Full Sequence	3.0	Sequence 3981 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237986.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   ||*||||**||||||||||||||* targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33 Target Full Sequence	3.0	Sequence 3981 from Patent EP2985353	NA	coding protein	psRNATarget
HI405856.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   ||*||||**||||||||||||||* targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33 Target Full Sequence	3.0	Sequence 3981 from Patent EP2074227	NA	coding protein	psRNATarget