ncRNA ID | osa-miRf10062-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - CUCGAUCUUCGCUUGAAUGGCC - NA |
Stem-loop(if miRNA) |
          UUC            C  GA    A        ---     --   G CUCCUCGAUC   GCUUGAAUGGCC GU  AGAG CAUGAUGC   CGGGA  ACG U ||||||||||   |||||||||||| ||  |||| ||||||||   |||||  ||| U GAGGAGCUAG   UGGACUUACCGG CG  UCUC GUGCUGUG   GCUCU  UGC C           ---            -  GC    C        UGU     GU   U |
Stem-loop sequence | CUCCUCGAUCUUCGCUUGAAUGGCCCGUGAAGAGACAUGAUGCCGGGAACGGUUCUCGUUGUCUCGUGUGUGUCGUGCCUCUCGGCGGCCAUUCAGGUGAUCGAGGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK242585.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J090010M20, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015756203.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group cellulose synthase-like protein E6 (LOC9269152), transcript variant X2, mRNA | cellulose synthase-like protein E6(LOC9269152) | coding protein | psRNATarget | |||||||||
XM_015756202.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group cellulose synthase-like protein E6 (LOC9269152), transcript variant X1, mRNA | cellulose synthase-like protein E6(LOC9269152) | coding protein | psRNATarget |