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BaseInfo

ncRNA ID osa-miRf10062-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - CUCGAUCUUCGCUUGAAUGGCC - NA
Stem-loop(if miRNA)           UUC            C  GA    A        ---     --   G
CUCCUCGAUC   GCUUGAAUGGCC GU  AGAG CAUGAUGC   CGGGA  ACG U
||||||||||   |||||||||||| ||  |||| ||||||||   |||||  ||| U
GAGGAGCUAG   UGGACUUACCGG CG  UCUC GUGCUGUG   GCUCU  UGC C
          ---            -  GC    C        UGU     GU   U
Stem-loop sequence CUCCUCGAUCUUCGCUUGAAUGGCCCGUGAAGAGACAUGAUGCCGGGAACGGUUCUCGUUGUCUCGUGUGUGUCGUGCCUCUCGGCGGCCAUUCAGGUGAUCGAGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK242585.1
ncRNA:22   CC---GGUAAGUUCGCUUCUAGCUC   1
  ||---|=||*|*|||||||||||||
targets:1145   GGAUCCUAUGCUAGCGAAGAUCGAG   1169

3.0 Oryza sativa Japonica Group cDNA, clone: J090010M20, full insert sequence NA coding protein psRNATarget
XM_015756203.1
ncRNA:22   CC---GGUAAGUUCGCUUCUAGCUC   1
  ||---|=||*|*|||||||||||||
targets:1137   GGAUCCUAUGCUAGCGAAGAUCGAG   1161

3.0 PREDICTED: Oryza sativa Japonica Group cellulose synthase-like protein E6 (LOC9269152), transcript variant X2, mRNA cellulose synthase-like protein E6(LOC9269152) coding protein psRNATarget
XM_015756202.1
ncRNA:22   CC---GGUAAGUUCGCUUCUAGCUC   1
  ||---|=||*|*|||||||||||||
targets:1137   GGAUCCUAUGCUAGCGAAGAUCGAG   1161

3.0 PREDICTED: Oryza sativa Japonica Group cellulose synthase-like protein E6 (LOC9269152), transcript variant X1, mRNA cellulose synthase-like protein E6(LOC9269152) coding protein psRNATarget