Search result

BaseInfo

ncRNA ID novel_zma_miR4638
Species Zea mays
Class miRNA
Genome position Chr2:26204213-26204310 [+]
Reference genome RefGen_v4
Source SRR1618882;SRR1618883
Length 23
Mature sequence(if miRNA) 76 - CUCGGCAAAGAAUAUGGCACUCA - 98
Stem-loop(if miRNA) --      ---      UA     G     -UUG  U              A
  AGUGUU   UUCUUU  CCGAG GUUUU    UG GGCACUCGGCAAAG G
  ||||||   ||||||  ||||| |||||    || ||||||||||||||
  UCACGG   AAGAAA  GGCUC CAAAA    GC CCGUGAGCCGUUUC C
AC      UAU      -C     A     UAAA  -              U
Stem-loop sequence AGUGUUUUCUUUUACCGAGGGUUUUUUGUGUGGCACUCGGCAAAGAGCUCUUUGCCGAGUGCCCGAAAUAAAACACUCGGCAAAGAAUAUGGCACUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT042352.1
ncRNA:23   ACUCACGGUAUAAGAAACGGCUC   1
  *|||||=|||||||||||||||*
targets:1213   CGAGUGUCAUAUUCUUUGCCGAU   1235

2.0 Zea mays full-length cDNA clone ZM_BFb0207J05 mRNA, complete cds NA coding protein psRNATarget
NM_001148473.2
ncRNA:23   ACUCACGGUAUAAGAAACGGCUC   1
  *|||||=|||||||||||||||*
targets:1263   CGAGUGUCAUAUUCUUUGCCGAU   1285

2.0 Zea mays Protein CHLORORESPIRATORY REDUCTION 6 chloroplastic (si707021b11), mRNA NA coding protein psRNATarget