ncRNA ID | novel_zma_miR4631 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:44979121-44979280 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287162 |
Length | 24 |
Mature sequence(if miRNA) | 137 - GUUUGGUUGUAGAGUGAACGGAAC - 160 |
Stem-loop(if miRNA) |
--                 AC        GC      G   GAGC    --------- UG  -A      G C    UC   UUG   GUUUGGUUGUAGAGUGA  GGAACGGA  GUGACU UGA    GGGA         U  GA  CGGAGC G UCCG  CCA   A   |||||||||||||||||  ||||||||  |||||| |||    ||||         |  ||  |||||| | ||||  |||   U   CAAACCAAUGUUUCAUU  UCUUGCCU  UACUGA GUU    CCCU         A  CU  GCCUUG U AGGC  GGU   U AA                 GA        --      G   -AAU    UAUAAGAGG GU  AG      G A    GA   UUU |
Stem-loop sequence | GUUUGGUUGUAGAGUGAACGGAACGGAGCGUGACUGUGAGAGCGGGAUUGGAACGGAGCGGCUCCGUCCCAUUGAUUUUUUGGAGCGGAAUGGUUCCGGAUCUGAGGAGAAUAUUCCCUAAUUGGAGUCAUUCCGUUCUAGUUACUUUGUAACCAAACAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020542520.1 |
|
1.5 | PREDICTED: Zea mays putative ubiquitin-conjugating enzyme E2 38 (LOC100502147), transcript variant X2, mRNA | NA | coding protein | psRNATarget |