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BaseInfo

ncRNA ID	osa-miRf10060-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - GAAGACGAGGUUGGCGAUGCCGA - NA
Stem-loop(if miRNA)	C   AU               G  G   ACCUU   GCCGGCCAUGACGGUCUUG GCA UCG  GUCGCCGGCCUUGUC UC ACG     GCC                   U ||| |||  ||||||||||||||| || |||     ||| CGU AGC  UAGCGGUUGGAGCAG AG UGC     CCA                   A    -   CG               A  A   ----A   GCAGCGAUUGUCUAUGAGC
Stem-loop sequence	GCACUCGAUGUCGCCGGCCUUGUCGUCGACGACCUUGCCGCCGGCCAUGACGGUCUUGUACGAGUAUCUGUUAGCGACGACCACGUAGAAGACGAGGUUGGCGAUGCCGAUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015776908.1	ncRNA:23   AGCCGUAGCGGUUGGAGCAGAAG   1   |||||=||||||||||||||||| targets:1895   UCGGCGUCGCCAACCUCGUCUUC   1917 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group protein NRT1/ PTR FAMILY 5.6 (LOC4334618), mRNA	protein NRT1/ PTR FAMILY 5.6(LOC4334618)	coding protein	psRNATarget
AK058972.1	ncRNA:23   AGCCGUAGCGGUUGGAGCAGAAG   1   |||||=||||||||||||||||| targets:1772   UCGGCGUCGCCAACCUCGUCUUC   1794 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:001-020-D02, full insert sequence	NA	coding protein	psRNATarget
AK099193.1	ncRNA:23   AGCCGUAGCGGUUGGAGCAGAAG   1   |||||=||||||||||||||||| targets:1773   UCGGCGUCGCCAACCUCGUCUUC   1795 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J023109G05, full insert sequence	NA	coding protein	psRNATarget
CT835058.1	ncRNA:23   AGCCGUAGCGGUUGGAGCAGAAG   1   |||*|=|||||||||||||||*| targets:792   UCGCCGUCGCCAACCUCGUCUAC   814 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN007O14, full insert sequence	NA	coding protein	psRNATarget
XM_015779077.1	ncRNA:23   AGCCGUAGCGGUUGGAGCAGAAG   1   |||*|=|||||||||||||||*| targets:791   UCGCCGUCGCCAACCUCGUCUAC   813 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335656 (LOC4335656), mRNA	uncharacterized LOC4335656(LOC4335656)	coding protein	psRNATarget
AK240915.1	ncRNA:23   AGCCGUAGCGGUUGGAGCAGAAG   1   |||*|=|||||||||||||||*| targets:727   UCGCCGUCGCCAACCUCGUCUAC   749 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065037K20, full insert sequence	NA	coding protein	psRNATarget
XM_015781121.1	ncRNA:23   AGCCGUA-GCGGUUGGAGCAGAAG   1   ||*||||-|*|||||||||||||| targets:2488   UCAGCAUUCACCAACCUCGUCUUC   2511 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group putative chloride channel-like protein CLC-g (LOC4337190), mRNA	putative chloride channel-like protein CLC-g(LOC4337190)	coding protein	psRNATarget
DQ272692.1	ncRNA:23   AGCCGUA-GCGGUUGGAGCAGAAG   1   ||*||||-|*|||||||||||||| targets:2403   UCAGCAUUCACCAACCUCGUCUUC   2426 Target Full Sequence	3.0	Oryza sativa (japonica cultivar-group) cultivar Wujin 9998-3 chloride channel-like protein Osclc mRNA, complete cds	NA	coding protein	psRNATarget
XM_015783355.1	ncRNA:23   AGC-CGUAGCGGUUGGAGCAGAAG   1   |||-||||||*||||||||||*|| targets:1775   UCGCGCAUCGACAACCUCGUCAUC   1798 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4338142 (LOC4338142), mRNA	uncharacterized LOC4338142(LOC4338142)	coding protein	psRNATarget
AK109834.1	ncRNA:23   AGC-CGUAGCGGUUGGAGCAGAAG   1   |||-||||||*||||||||||*|| targets:1419   UCGCGCAUCGACAACCUCGUCAUC   1442 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-148-D01, full insert sequence	NA	coding protein	psRNATarget
XM_015769004.1	ncRNA:23   AGC-CGUAGCGGUUGGAGCAGAAG   1   |||-||||||*||||||||||*|| targets:783   UCGCGCAUCGACAACCUCGUCGUC   806 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280011 (LOC107280011), mRNA	uncharacterized LOC107280011(LOC107280011)	coding protein	psRNATarget
XM_015761065.1	ncRNA:23   AGCCGUAGCGGUUGGAGCAGAAG   1   *||||=*||*||||||||||||| targets:635   GCGGCGGCGGCAACCUCGUCUUC   657 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group putative serpin-Z6A (LOC9268573), mRNA	putative serpin-Z6A(LOC9268573)	coding protein	psRNATarget
AK318566.1	ncRNA:23   AGCCGUA-GCGGUUGGAGCAGAAG   1   ||*||||-|*|||||||||||||| targets:298   UCAGCAUUCACCAACCUCGUCUUC   321 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J080039K07, full insert sequence	NA	coding protein	psRNATarget
CT835059.1	ncRNA:23   AGCCGUA-GCGGUUGGAGCAGAAG   1   ||*||||-|*|||||||||||||| targets:191   UCAGCAUUCACCAACCUCGUCUUC   214 Target Full Sequence	3.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN008G17, full insert sequence	NA	coding protein	psRNATarget
AK099177.1	ncRNA:23   AGCCGUAGCGGUUGGAGCAGAAG   1   |*|||||||*|||*||||||||| targets:255   UGGGCAUCGGCAAGCUCGUCUUC   277 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023096J12, full insert sequence	NA	coding protein	psRNATarget