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BaseInfo

ncRNA ID	ath-miRf10054-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GUUAGGAGAGCUGUUAAGAAG - NA
Stem-loop(if miRNA)	C         G           CCUUA  AAACAUGGCCUAACAGCCGUUAUC GUUAACACU CUUAACAGC CUCCUAACAGC     CA                        G ||||||||| ||||||||| |||||||||||     ||                        U CAAUUGUGA GAAUUGUCG GAGGAUUGUCG     GA                        U          A         A           -CAUU  UUGUUGACAAAAGCAGGAAUUUGG
Stem-loop sequence	GUUAACACUCCUUAACAGCGCUCCUAACAGCCCUUACAAAACAUGGCCUAACAGCCGUUAUCGUUGGUUUAAGGACGAAAACAGUUGUUAGUUACGCUGUUAGGAGAGCUGUUAAGAAGUGUUAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_102048.1	ncRNA:21   GAAGAAUUGUCGAGAGGAUUG   1   |||||||||||||||||*||| targets:1045   CUUCUUAACAGCUCUCCAAAC   1065 Target Full Sequence	1.5	Arabidopsis thaliana F-box/RNI-like/FBD-like domains-containing protein partial mRNA	F-box/RNI-like/FBD-like domains-containing protein(AT1G21990)	coding protein	psRNATarget
AK228298.1	ncRNA:21   GAAGAAU---UGUCGAGAGGAUUG   1   =*|||||---|||||||||||||| targets:1901   UGUCUUAGACACAGCUCUCCUAAC   1924 Target Full Sequence	3.0	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-73-N13	NA	coding protein	psRNATarget
NM_125157.3	ncRNA:21   GAAGAAU---UGUCGAGAGGAUUG   1   =*|||||---|||||||||||||| targets:1729   UGUCUUAGACACAGCUCUCCUAAC   1752 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein (XBAT32), mRNA	hypothetical protein(XBAT32)	coding protein	psRNATarget
BX832696.1	ncRNA:21   GAAGAAU---UGUCGAGAGGAUUG   1   =*|||||---|||||||||||||| targets:1611   UGUCUUAGACACAGCUCUCCUAAC   1634 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH90ZC01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BT011688.1	ncRNA:21   GAAGAAU---UGUCGAGAGGAUUG   1   =*|||||---|||||||||||||| targets:1601   UGUCUUAGACACAGCUCUCCUAAC   1624 Target Full Sequence	3.0	Arabidopsis thaliana At5g57740 gene, complete cds	NA	coding protein	psRNATarget
BT012272.1	ncRNA:21   GAAGAAU---UGUCGAGAGGAUUG   1   =*|||||---|||||||||||||| targets:1224   UGUCUUAGACACAGCUCUCCUAAC   1247 Target Full Sequence	3.0	Arabidopsis thaliana At5g57740 gene, complete cds	NA	coding protein	psRNATarget