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BaseInfo

ncRNA ID novel_zma_miR4629
Species Zea mays
Class miRNA
Genome position Chr2:200184601-200184659 [-]
Reference genome RefGen_v4
Source SRR1618882;SRR4237222;SRR4237223;SRR4237224
Length 22
Mature sequence(if miRNA) 1 - GCACUUGCUGCUGAUUACGGCC - 22
Stem-loop(if miRNA) --GG GG            A   UGGUUGG
    G  GUCAGCAGCGGG UGC       C
    |  |||||||||||| |||
    C  UAGUCGUCGUUC ACG       G
CCGG AU            -   UGUUGUA
Stem-loop sequence GGGGGGUCAGCAGCGGGAUGCUGGUUGGCGAUGUUGUGCACUUGCUGCUGAUUACGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ093195.1
ncRNA:22   CCGGCAUUAGUCGUCGUUCACG   1
  **|||||*|||*||||||||||
targets:61   UCCCGUACUCAUCAGCAAGUGC   82

2.5 TSA: Zea mays contig28845, mRNA sequence NA coding protein psRNATarget
EZ107374.1
ncRNA:22   CCGGCAUUAGUCGUCGUUCACG   1
  **|||||*|||*||||||||||
targets:656   UCCCGUACUCAUCAGCAAGUGC   677

2.5 TSA: Zea mays contig43032, mRNA sequence NA coding protein psRNATarget