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BaseInfo

ncRNA ID	novel_zma_miR4626
Species	Zea mays
Class	miRNA
Genome position	Chr5:119953820-119954019 [-]
Reference genome	RefGen_v4
Source	SRR2287162
Length	21
Mature sequence(if miRNA)	180 - UGAUAUCACAUGUAGAGGCUG - 200
Stem-loop(if miRNA)	--        C                           A                      AU   GA    C         AU    CA AUGAAAUCA   UGAUAUCA AUGUAGAGGCUGUGAUAAAAAUUUGAC CUGUUUCGUGAAAGUUGUCACA  CUA  UGUA AAGCCUAGC  GCCU  C         U   |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||  |||  |||| |||||||||  ||||  |         G   ACUAUAGU UACAUCUCCGAUACUAUUUUUAAACUG GAUAAAGCACUUUCAACAGUGU  GAU  ACAU UUUGGAUCG  CGGA  G         A GU        U                           G                      GC   AC    A         AC    -A CAUCUUCAA
Stem-loop sequence	UGAUAUCACAUGUAGAGGCUGUGAUAAAAAUUUGACACUGUUUCGUGAAAGUUGUCACAAUCUAGAUGUACAAGCCUAGCAUGCCUCACAUGAAAUCAUGAAACUUCUACGAAGGCCAGCUAGGUUUAUACACAUAGCGUGUGACAACUUUCACGAAAUAGGGUCAAAUUUUUAUCAUAGCCUCUACAUUUGAUAUCAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ089840.1	ncRNA:21   GUCGGAGAUGUACACUAUAGU   1   ||||||||||||*|||||||| targets:2   CAGCCUCUACAUAUGAUAUCA   22 Target Full Sequence	1.5	TSA: Zea mays contig25486, mRNA sequence	NA	coding protein	psRNATarget
LQ235339.1	ncRNA:21   GUCGGAGAUGUACACUAUAGU   1   ||||||||||||*|||||||| targets:206   CAGCCUCUACAUAUGAUAUCA   226 Target Full Sequence	1.5	Sequence 1334 from Patent EP2985353	NA	coding protein	psRNATarget
JB163670.1	ncRNA:21   GUCGGAGAUGUACACUAUAGU   1   ||||||||||||*|||||||| targets:206   CAGCCUCUACAUAUGAUAUCA   226 Target Full Sequence	1.5	Sequence 1334 from Patent EP2559767	NA	coding protein	psRNATarget
HI403209.1	ncRNA:21   GUCGGAGAUGUACACUAUAGU   1   ||||||||||||*|||||||| targets:206   CAGCCUCUACAUAUGAUAUCA   226 Target Full Sequence	1.5	Sequence 1334 from Patent EP2074227	NA	coding protein	psRNATarget