Search result

BaseInfo

ncRNA ID	novel_zma_miR4624
Species	Zea mays
Class	miRNA
Genome position	Chr5:138922201-138922248 [-]
Reference genome	RefGen_v4
Source	SRR2287162
Length	24
Mature sequence(if miRNA)	1 - GGCGCGGACUGUCCGGCACGUCAG - 24
Stem-loop(if miRNA)	--C      -    C     -   U    ACGUGC GGAC GUCCG GCC C    |||||| |||| ||||| |||    UGCACG CCUG CAGGC CGG A GAC      G    U     G   G
Stem-loop sequence	CACGUGCGGACCGUCCGGCCUCAGGGCGCGGACUGUCCGGCACGUCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU952231.1	ncRNA:24   GACUGCACGGCCUGUCAGGCGCGG   1   =|||||*|||||||=||||||||| targets:492   UUGACGAGCCGGACGGUCCGCGCC   515 Target Full Sequence	2.5	Zea mays clone 1234152 mRNA sequence	NA	coding protein	psRNATarget
NM_001149438.1	ncRNA:24   GACUGCACGGCCUGUCAGGCGCGG   1   |||-=|*|||||||=||||||||| targets:1935   CUG-UGGGCCGGACGGUCCGCGCC   1957 Target Full Sequence	2.5	Zea mays uncharacterized LOC100275341 (LOC100275341), mRNA	NA	coding protein	psRNATarget
EU955374.1	ncRNA:24   GACUGCACGGCCUGUCAGGCGCGG   1   |||-=|*|||||||=||||||||| targets:1935   CUG-UGGGCCGGACGGUCCGCGCC   1957 Target Full Sequence	2.5	Zea mays clone 1529849 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
LQ240831.1	ncRNA:24   GACUGCACGGCCUGUCAGGCGCGG   1   |||--|*||||||||||||||||* targets:34   CUG--GGGCCGGACAGUCCGCGCG   55 Target Full Sequence	2.0	Sequence 6826 from Patent EP2985353	NA	coding protein	psRNATarget
HI408701.1	ncRNA:24   GACUGCACGGCCUGUCAGGCGCGG   1   |||--|*||||||||||||||||* targets:34   CUG--GGGCCGGACAGUCCGCGCG   55 Target Full Sequence	2.0	Sequence 6826 from Patent EP2074227	NA	coding protein	psRNATarget
JB169162.1	ncRNA:24   GACUGCACGGCCUGUCAGGCGCGG   1   |||--|*||||||||||||||||* targets:34   CUG--GGGCCGGACAGUCCGCGCG   55 Target Full Sequence	2.0	Sequence 6826 from Patent EP2559767	NA	coding protein	psRNATarget