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BaseInfo

ncRNA ID novel_zma_miR4604
Species Zea mays
Class miRNA
Genome position Chr1:202306147-202306231 [+]
Reference genome RefGen_v4
Source SRR1618882
Length 24
Mature sequence(if miRNA) 62 - CGGGCAGCACUCGGCAAAGCCGCC - 85
Stem-loop(if miRNA) --                -CAA   -C               A
  CGGCUUUGCCGAGUGU    CGG  GACACUCGGCAAAGA G
  ||||||||||||||||    |||  ||||||||||||||| A
  GCCGAAACGGCUCACG    GCC  CUGUGAGCCGUUUCU U
CC                ACGG   UU               A
Stem-loop sequence CGGCUUUGCCGAGUGUCAACGGCGACACUCGGCAAAGAAGAUAUCUUUGCCGAGUGUCUUCCGGGCAGCACUCGGCAAAGCCGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ237992.1
ncRNA:24   CCGCCGAAACGGCUCACGACGGGC   1
  |*|**|||||||||||||||=||*
targets:95   GCCCCCUUUGCCGAGUGCUGUCCU   118

2.5 Sequence 3987 from Patent EP2985353 NA coding protein psRNATarget
HI405862.1
ncRNA:24   CCGCCGAAACGGCUCACGACGGGC   1
  |*|**|||||||||||||||=||*
targets:95   GCCCCCUUUGCCGAGUGCUGUCCU   118

2.5 Sequence 3987 from Patent EP2074227 NA coding protein psRNATarget
JB166323.1
ncRNA:24   CCGCCGAAACGGCUCACGACGGGC   1
  |*|**|||||||||||||||=||*
targets:95   GCCCCCUUUGCCGAGUGCUGUCCU   118

2.5 Sequence 3987 from Patent EP2559767 NA coding protein psRNATarget