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BaseInfo

ncRNA ID	novel_zma_miR4599
Species	Zea mays
Class	miRNA
Genome position	Chr1:184153602-184153695 [+]
Reference genome	RefGen_v4
Source	SRR1618882
Length	24
Mature sequence(if miRNA)	1 - AGCGAGAAGCCGUCGGACAUAAGG - 24
Stem-loop(if miRNA)	-AGCGAGA               GG  AGG    G                    AGCCGUCGGACAUAA  UU   UUAU UCCGACGGUAUU         |||||||||||||||  ||   |||| |||||||||||U         UCGGCAGCCUGUAUU  AA   AAUA AGGCUGCCGUAA GAUCACAA               GG  CGG    G
Stem-loop sequence	AGCGAGAAGCCGUCGGACAUAAGGUUAGGUUAUGUCCGACGGUAUUUAAUGCCGUCGGAGAUAAGGCAAGGUUAUGUCCGACGGCUAACACUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU975030.1	ncRNA:24   GGAAUACAGGCUGCCGAAGAGCGA   1   ||--||*|||||||*||||||||| targets:128   CC--AUCUCCGACGCCUUCUCGCU   149 Target Full Sequence	2.5	Zea mays clone 465469 ATP binding protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020538703.1	ncRNA:24   GGAAUACAGGCUGCCGAAGAGCGA   1   ||--||*|||||||*||||||||| targets:328   CC--AUCUCCGACGCCUUCUCGCU   349 Target Full Sequence	2.5	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At1g73400, mitochondrial-like (LOC109940007), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020538704.1	ncRNA:24   GGAAUACAGGCUGCCGAAGAGCGA   1   ||--||*|||||||*||||||||| targets:328   CC--AUCUCCGACGCCUUCUCGCU   349 Target Full Sequence	2.5	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At1g73400, mitochondrial-like (LOC109940007), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020538702.1	ncRNA:24   GGAAUACAGGCUGCCGAAGAGCGA   1   ||--||*|||||||*||||||||| targets:352   CC--AUCUCCGACGCCUUCUCGCU   373 Target Full Sequence	2.5	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At1g73400, mitochondrial-like (LOC109940007), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020538701.1	ncRNA:24   GGAAUACAGGCUGCCGAAGAGCGA   1   ||--||*|||||||*||||||||| targets:300   CC--AUCUCCGACGCCUUCUCGCU   321 Target Full Sequence	2.5	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At1g73400, mitochondrial-like (LOC109940007), transcript variant X1, mRNA	NA	coding protein	psRNATarget