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BaseInfo

ncRNA ID novel_zma_miR4590
Species Zea mays
Class miRNA
Genome position Chr4:165290249-165290315 [-]
Reference genome RefGen_v4
Source SRR2287162
Length 24
Mature sequence(if miRNA) 1 - GGGACUGCACUGCGUACACCUUCC - 24
Stem-loop(if miRNA) --   U  -    -    UGCU       UUCC   
  AAG UG ACGC GUGC    GUUCUUC    CGGC
  ||| || |||| ||||    |||||||    |||G
  UUC AC UGCG CACG    CAGGGAG    GCCA
CC   C  A    U    ---U       -CUU   
Stem-loop sequence AAGUUGACGCGUGCUGCUGUUCUUCUUCCCGGCGACCGUUCGAGGGACUGCACUGCGUACACCUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ109992.1
ncRNA:24   CCUUCCACAUGCGUCACGUCAGGG   1
  ||*||*|||||||||||||||=||
targets:96   GGCAGAUGUACGCAGUGCAGUUCC   119

2.5 TSA: Zea mays contig45652, mRNA sequence NA coding protein psRNATarget