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BaseInfo

ncRNA ID novel_zma_miR4588
Species Zea mays
Class miRNA
Genome position Chr4:184360763-184360881 [-]
Reference genome RefGen_v4
Source SRR2287162
Length 21
Mature sequence(if miRNA) 99 - UAGUCAUUUUAUUUUAUUUCA - 119
Stem-loop(if miRNA) --                      U     CA A    -A       C           U
  UAGUCAUUUUAUUUUAUUUCAU UUGGU  C AAUU  UCAAAUA AGAAACAAAAA A
  |||||||||||||||||||||| |||||  | ||||  ||||||| |||||||||||
  AUCAGUGAGAUAAAAUAAAGUA AAUCA  G UUGA  GGUUUAU UCUUUGUUUUU U
AA                      U     AG A    AC       A           A
Stem-loop sequence UAGUCAUUUUAUUUUAUUUCAUUUUGGUCACAAAUUAUCAAAUACAGAAACAAAAAUAUAUUUUUGUUUCUAUAUUUGGCAAGUUAGGAACUAAUAUGAAAUAAAAUAGAGUGACUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001143192.1
ncRNA:21   ACUUUAUUUUAUUUUACUGAU   1
  **||||||||||||||*|||=
targets:798   AAAAAUAAAAUAAAAUAACUG   818

2.5 Zea mays hypothetical protein (LOC100216793), mRNA NA coding protein psRNATarget
BT037354.1
ncRNA:21   ACUUUAUUUUAUUUUACUGAU   1
  **||||||||||||||*|||=
targets:798   AAAAAUAAAAUAAAAUAACUG   818

2.5 Zea mays full-length cDNA clone ZM_BFb0165K03 mRNA, complete cds NA coding protein psRNATarget