ncRNA ID | novel_zma_miR4588 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:184360763-184360881 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287162 |
Length | 21 |
Mature sequence(if miRNA) | 99 - UAGUCAUUUUAUUUUAUUUCA - 119 |
Stem-loop(if miRNA) |
--                      U     CA A    -A       C           U   UAGUCAUUUUAUUUUAUUUCAU UUGGU  C AAUU  UCAAAUA AGAAACAAAAA A   |||||||||||||||||||||| |||||  | ||||  ||||||| |||||||||||   AUCAGUGAGAUAAAAUAAAGUA AAUCA  G UUGA  GGUUUAU UCUUUGUUUUU U AA                      U     AG A    AC       A           A |
Stem-loop sequence | UAGUCAUUUUAUUUUAUUUCAUUUUGGUCACAAAUUAUCAAAUACAGAAACAAAAAUAUAUUUUUGUUUCUAUAUUUGGCAAGUUAGGAACUAAUAUGAAAUAAAAUAGAGUGACUAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001143192.1 |
|
2.5 | Zea mays hypothetical protein (LOC100216793), mRNA | NA | coding protein | psRNATarget | |||||||||
BT037354.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0165K03 mRNA, complete cds | NA | coding protein | psRNATarget |