ncRNA ID | novel_zma_miR4577 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:206583351-206583526 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287162 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCUGGUGCGGCUGAACCGGAUGGC - 24 |
Stem-loop(if miRNA) |
--      G     GA       G     A  G    A  A                     A   A    CA      C       A   CCUGGU CGGCU  ACCGGAU GCACC UU GGCU GG CUUUCUCUAGUUAUUGGAAGC UAG GCUC  AAUAUA AAACUAU U   |||||| |||||  ||||||| ||||| || |||| || ||||||||||||||||||||| ||| ||||  |||||| |||||||   GGAUCA GCCGA  UGGCCUA CGUGG AA CUGG CC GAAGGAGAUCAAUAACCUUCG GUC CGAG  UUAUAU UUUGAUA A CU      G     GC       A     C  G    A  C                     G   C    AA      A       U |
Stem-loop sequence | CCUGGUGCGGCUGAACCGGAUGGCACCAUUGGGCUAGGACUUUCUCUAGUUAUUGGAAGCAUAGAGCUCCAAAUAUACAAACUAUAUAUAUAGUUUAUAUAUUAAGAGCCCUGGGCUUCCAAUAACUAGAGGAAGCCCAGGUCGAACGGUGCAAUCCGGUCGAGCCGGACUAGGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020544200.1 |
|
1.5 | PREDICTED: Zea mays uncharacterized LOC109942302 (LOC109942302), mRNA | NA | coding protein | psRNATarget |