Search result

BaseInfo

ncRNA ID	novel_zma_miR4564
Species	Zea mays
Class	miRNA
Genome position	Chr4:224094380-224094426 [+]
Reference genome	RefGen_v4
Source	SRR2287161
Length	21
Mature sequence(if miRNA)	1 - CCUGUUUGGGAGGGCUCCGGC - 21
Stem-loop(if miRNA)	-C                 GG U   CUGUUUGGGAGGGCUCC  C C   |||||||||||||||||  |   GGCAAACCCUCCCGAGG  G U CU                 AG U
Stem-loop sequence	CCUGUUUGGGAGGGCUCCGGCUCUUGGAGGAGCCCUCCCAAACGGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ106247.1	ncRNA:21   CGGCCUCGGGAGGGUUUGUCC   1   |||||||||||||||||||*| targets:23   GCCGGAGCCCUCCCAAACAAG   43 Target Full Sequence	1.5	TSA: Zea mays contig41905, mRNA sequence	NA	coding protein	psRNATarget
XM_008646240.2	ncRNA:21   CGGCCUCGGGAGGGUUUGUCC   1   ||||*||||||*||||||||| targets:879   GCCGAAGCCCUACCAAACAGG   899 Target Full Sequence	2.5	PREDICTED: Zea mays transcription factor MYB122 (LOC541755), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008665420.1	ncRNA:21   CGGCCUCGGGAGGGUUUGUCC   1   **||*|||||||||||||||* targets:552   AACGAAGCCCUCCCAAACAGU   572 Target Full Sequence	2.0	PREDICTED: Zea mays hypothetical protein (LOC103642103), mRNA	NA	coding protein	psRNATarget