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BaseInfo

ncRNA ID novel_zma_miR4558
Species Zea mays
Class miRNA
Genome position Chr3:51744121-51744244 [+]
Reference genome RefGen_v4
Source SRR2287161;SRR2089702
Length 24
Mature sequence(if miRNA) 101 - AAUCCGGCACAAACGAACAAGGCA - 124
Stem-loop(if miRNA) --                       --CACC      C     -    AAUCAAA    --A  U
  UCUUGUUCGUUUGUGUCGGAUUG      CGGAAU GUUUC AGCU       GUUU   UA A
  |||||||||||||||||||||||      |||||| ||||| ||||       ||||   || A
  GGAACAAGCAAACACGGCCUAAC      GCCUUG UAAAG UUGG       CGAA   AU A
AC                       CACCCA      C     A    --CCUAA    GAG  U
Stem-loop sequence UCUUGUUCGUUUGUGUCGGAUUGCACCCGGAAUCGUUUCAGCUAAUCAAAGUUUAUAUAAAUUAGAGAAGCAAUCCGGUUAGAAAUCGUUCCGACCCACCAAUCCGGCACAAACGAACAAGGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB166406.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4070 from Patent EP2559767 NA coding protein psRNATarget
HI405940.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4065 from Patent EP2074227 NA coding protein psRNATarget
LQ238075.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4070 from Patent EP2985353 NA coding protein psRNATarget
JB166401.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4065 from Patent EP2559767 NA coding protein psRNATarget
JB166400.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4064 from Patent EP2559767 NA coding protein psRNATarget
LQ238070.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4065 from Patent EP2985353 NA coding protein psRNATarget
HI405945.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4070 from Patent EP2074227 NA coding protein psRNATarget
JB166397.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4061 from Patent EP2559767 NA coding protein psRNATarget
LQ238066.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4061 from Patent EP2985353 NA coding protein psRNATarget
LQ238069.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4064 from Patent EP2985353 NA coding protein psRNATarget
HI405936.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4061 from Patent EP2074227 NA coding protein psRNATarget
HI405939.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4064 from Patent EP2074227 NA coding protein psRNATarget
HI405933.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:11   GGCCUUGUUCGUUUGUGCCGGAUU   34

0.0 Sequence 4058 from Patent EP2074227 NA coding protein psRNATarget
JB166394.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:11   GGCCUUGUUCGUUUGUGCCGGAUU   34

0.0 Sequence 4058 from Patent EP2559767 NA coding protein psRNATarget
LQ238063.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:11   GGCCUUGUUCGUUUGUGCCGGAUU   34

0.0 Sequence 4058 from Patent EP2985353 NA coding protein psRNATarget
JB166265.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:12   GGCCUUGUUCGUUUGUGCCGGAUU   35

0.0 Sequence 3929 from Patent EP2559767 NA coding protein psRNATarget
LQ237934.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:12   GGCCUUGUUCGUUUGUGCCGGAUU   35

0.0 Sequence 3929 from Patent EP2985353 NA coding protein psRNATarget
HI405804.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:12   GGCCUUGUUCGUUUGUGCCGGAUU   35

0.0 Sequence 3929 from Patent EP2074227 NA coding protein psRNATarget
HI405948.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4073 from Patent EP2074227 NA coding protein psRNATarget
JB166409.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4073 from Patent EP2559767 NA coding protein psRNATarget
LQ238078.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:8   GGCCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4073 from Patent EP2985353 NA coding protein psRNATarget
EU942882.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:72   GGCCUUGUUCGUUUGUGCCGGAUU   95

0.0 Zea mays clone 1543225 mRNA sequence NA coding protein psRNATarget
EZ109082.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:15   GGCCUUGUUCGUUUGUGCCGGAUU   38

0.0 TSA: Zea mays contig44741, mRNA sequence NA coding protein psRNATarget
EU953779.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:621   GGCCUUGUUCGUUUGUGCCGGAUU   644

0.0 Zea mays clone 1445891 mRNA sequence NA coding protein psRNATarget
AY107168.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:858   GGCCUUGUUCGUUUGUGCCGGAUU   881

0.0 Zea mays PCO087750 mRNA sequence NA coding protein psRNATarget
NM_001138362.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:1419   GGCCUUGUUCGUUUGUGCCGGAUU   1442

0.0 Zea mays Enhanced ethylene response protein 5 (LOC100193209), mRNA NA coding protein psRNATarget
BT035415.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:1419   GGCCUUGUUCGUUUGUGCCGGAUU   1442

0.0 Zea mays full-length cDNA clone ZM_BFb0059N16 mRNA, complete cds NA coding protein psRNATarget
XM_020538690.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||||||||||||
targets:4119   GGCCUUGUUCGUUUGUGCCGGAUU   4142

0.0 PREDICTED: Zea mays kinesin-like protein KIN-4C (LOC103627710), mRNA NA coding protein psRNATarget
HI405870.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:1   GGCCUUGUUCGUUUGUGUCGGAUU   24

1.5 Sequence 3995 from Patent EP2074227 NA coding protein psRNATarget
JB166331.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:1   GGCCUUGUUCGUUUGUGUCGGAUU   24

1.5 Sequence 3995 from Patent EP2559767 NA coding protein psRNATarget
LQ238000.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:1   GGCCUUGUUCGUUUGUGUCGGAUU   24

1.5 Sequence 3995 from Patent EP2985353 NA coding protein psRNATarget
HI405951.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|=|||||||||||||||||||||
targets:8   GGUCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4076 from Patent EP2074227 NA coding protein psRNATarget
JB166412.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|=|||||||||||||||||||||
targets:8   GGUCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4076 from Patent EP2559767 NA coding protein psRNATarget
LQ238081.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|=|||||||||||||||||||||
targets:8   GGUCUUGUUCGUUUGUGCCGGAUU   31

0.0 Sequence 4076 from Patent EP2985353 NA coding protein psRNATarget
JB166422.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:10   GGCCUUGUUCGUUUGUGUCGGAUU   33

1.5 Sequence 4086 from Patent EP2559767 NA coding protein psRNATarget
LQ238091.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:10   GGCCUUGUUCGUUUGUGUCGGAUU   33

1.5 Sequence 4086 from Patent EP2985353 NA coding protein psRNATarget
HI405961.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:10   GGCCUUGUUCGUUUGUGUCGGAUU   33

1.5 Sequence 4086 from Patent EP2074227 NA coding protein psRNATarget
HI405931.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:11   GGCCUUGUUCGUUUGUGUCGGAUU   34

1.5 Sequence 4056 from Patent EP2074227 NA coding protein psRNATarget
HI405934.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:11   GGCCUUGUUCGUUUGUGUCGGAUU   34

1.5 Sequence 4059 from Patent EP2074227 NA coding protein psRNATarget
JB166389.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:11   GGCCUUGUUCGUUUGUGUCGGAUU   34

1.5 Sequence 4053 from Patent EP2559767 NA coding protein psRNATarget
LQ238061.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:11   GGCCUUGUUCGUUUGUGUCGGAUU   34

1.5 Sequence 4056 from Patent EP2985353 NA coding protein psRNATarget
HI405928.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:11   GGCCUUGUUCGUUUGUGUCGGAUU   34

1.5 Sequence 4053 from Patent EP2074227 NA coding protein psRNATarget
LQ238064.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:11   GGCCUUGUUCGUUUGUGUCGGAUU   34

1.5 Sequence 4059 from Patent EP2985353 NA coding protein psRNATarget
JB166395.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:11   GGCCUUGUUCGUUUGUGUCGGAUU   34

1.5 Sequence 4059 from Patent EP2559767 NA coding protein psRNATarget
LQ238058.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:11   GGCCUUGUUCGUUUGUGUCGGAUU   34

1.5 Sequence 4053 from Patent EP2985353 NA coding protein psRNATarget
JB166392.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:11   GGCCUUGUUCGUUUGUGUCGGAUU   34

1.5 Sequence 4056 from Patent EP2559767 NA coding protein psRNATarget
JB166375.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4039 from Patent EP2559767 NA coding protein psRNATarget
HI405906.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4031 from Patent EP2074227 NA coding protein psRNATarget
HI405907.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4032 from Patent EP2074227 NA coding protein psRNATarget
LQ238060.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|=|||||||||||||||||||||
targets:12   GGUCUUGUUCGUUUGUGCCGGAUU   35

0.0 Sequence 4055 from Patent EP2985353 NA coding protein psRNATarget
LQ238035.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4030 from Patent EP2985353 NA coding protein psRNATarget
JB166391.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|=|||||||||||||||||||||
targets:12   GGUCUUGUUCGUUUGUGCCGGAUU   35

0.0 Sequence 4055 from Patent EP2559767 NA coding protein psRNATarget
LQ238040.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4035 from Patent EP2985353 NA coding protein psRNATarget
HI405905.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4030 from Patent EP2074227 NA coding protein psRNATarget
JB166371.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4035 from Patent EP2559767 NA coding protein psRNATarget
JB166366.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4030 from Patent EP2559767 NA coding protein psRNATarget
LQ238036.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4031 from Patent EP2985353 NA coding protein psRNATarget
LQ238044.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4039 from Patent EP2985353 NA coding protein psRNATarget
JB166367.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4031 from Patent EP2559767 NA coding protein psRNATarget
LQ238037.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4032 from Patent EP2985353 NA coding protein psRNATarget
HI405910.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4035 from Patent EP2074227 NA coding protein psRNATarget
HI405930.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|=|||||||||||||||||||||
targets:12   GGUCUUGUUCGUUUGUGCCGGAUU   35

0.0 Sequence 4055 from Patent EP2074227 NA coding protein psRNATarget
HI405914.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4039 from Patent EP2074227 NA coding protein psRNATarget
JB166368.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:12   GGCCUUGUUCGUUUGUGUCGGAUU   35

1.5 Sequence 4032 from Patent EP2559767 NA coding protein psRNATarget
EZ056395.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:35   GGCCUUGUUCGUUUGUGUCGGAUU   58

1.5 TSA: Zea mays contig57517, mRNA sequence NA coding protein psRNATarget
EZ061700.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||=||||||||||||||||||||
targets:89   GGCUUUGUUCGUUUGUGCCGGAUU   112

0.0 TSA: Zea mays contig62822, mRNA sequence NA coding protein psRNATarget
AY105834.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:756   GGCCUUGUUCGUUUGUGUCGGAUU   779

1.5 Zea mays PCO093864 mRNA sequence NA coding protein psRNATarget
XM_008673797.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:838   GGCCUUGUUCGUUUGUGUCGGAUU   861

1.5 PREDICTED: Zea mays uncharacterized LOC100278465 (LOC100278465), transcript variant X2, mRNA NA coding protein psRNATarget
BT017671.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|=|||||||||||||||||||||
targets:870   GGUCUUGUUCGUUUGUGCCGGAUU   893

0.0 Zea mays clone EL01N0442B02.c mRNA sequence NA coding protein psRNATarget
NM_001111367.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:1094   GGCCUUGUUCGUUUGUGUCGGAUU   1117

1.5 Zea mays Ferredoxin-6, chloroplastic (pco072676(750)), mRNA NA coding protein psRNATarget
BT019200.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:942   GGCCUUGUUCGUUUGUGUCGGAUU   965

1.5 Zea mays clone Contig873.F mRNA sequence NA coding protein psRNATarget
NM_001196885.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:1188   GGCCUUGUUCGUUUGUGUCGGAUU   1211

1.5 Zea mays Protein kinase superfamily protein (LOC100502407), mRNA NA coding protein psRNATarget
BT088026.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:1188   GGCCUUGUUCGUUUGUGUCGGAUU   1211

1.5 Zea mays full-length cDNA clone ZM_BFb0366I22 mRNA, complete cds NA coding protein psRNATarget
XM_020549216.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|=|||||||||||||||||||||
targets:139   GGUCUUGUUCGUUUGUGCCGGAUU   162

0.0 PREDICTED: Zea mays putative disease resistance protein RGA4 (LOC103649444), mRNA NA coding protein psRNATarget
BT068430.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:454   GGCCUUGUUCGUUUGUGUCGGAUU   477

1.5 Zea mays full-length cDNA clone ZM_BFb0175H08 mRNA, complete cds NA coding protein psRNATarget
XM_008647453.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:3271   GGCCUUGUUCGUUUGUGUCGGAUU   3294

1.5 PREDICTED: Zea mays uncharacterized LOC103627145 (LOC103627145), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008647452.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:3259   GGCCUUGUUCGUUUGUGUCGGAUU   3282

1.5 PREDICTED: Zea mays uncharacterized LOC103627145 (LOC103627145), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020539404.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:3426   GGCCUUGUUCGUUUGUGUCGGAUU   3449

1.5 PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020539406.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:3444   GGCCUUGUUCGUUUGUGUCGGAUU   3467

1.5 PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X6, mRNA NA coding protein psRNATarget
XM_020539386.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:3461   GGCCUUGUUCGUUUGUGUCGGAUU   3484

1.5 PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020539392.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:3479   GGCCUUGUUCGUUUGUGUCGGAUU   3502

1.5 PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020539417.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:3729   GGCCUUGUUCGUUUGUGUCGGAUU   3752

1.5 PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X9, mRNA NA coding protein psRNATarget
XM_020538731.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||=||||||
targets:5239   GGCCUUGUUCGUUUGUGUCGGAUU   5262

1.5 PREDICTED: Zea mays UDP-glucose:glycoprotein glucosyltransferase (LOC103627875), mRNA NA coding protein psRNATarget
XM_020550140.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|=|||||||||||||||||||||
targets:3430   GGUCUUGUUCGUUUGUGCCGGAUU   3453

0.0 PREDICTED: Zea mays rust resistance kinase Lr10 (LOC103649884), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008675573.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|=|||||||||||||||||||||
targets:3430   GGUCUUGUUCGUUUGUGCCGGAUU   3453

0.0 PREDICTED: Zea mays rust resistance kinase Lr10 (LOC103649884), transcript variant X2, mRNA NA coding protein psRNATarget
EZ517098.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|=||||||||||||||=||||||
targets:98   GGUCUUGUUCGUUUGUGUCGGAUU   121

1.5 TSA: Zea mays cultivar W22 CL501Contig1.betc, mRNA sequence NA coding protein psRNATarget
XM_020548712.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **||||||||||||||||||||||
targets:2056   GACCUUGUUCGUUUGUGCCGGAUU   2079

0.0 PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008672661.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **||||||||||||||||||||||
targets:2138   GACCUUGUUCGUUUGUGCCGGAUU   2161

0.0 PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020548713.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **||||||||||||||||||||||
targets:2151   GACCUUGUUCGUUUGUGCCGGAUU   2174

0.0 PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X4, mRNA NA coding protein psRNATarget
XM_008672662.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **||||||||||||||||||||||
targets:2180   GACCUUGUUCGUUUGUGCCGGAUU   2203

0.0 PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X6, mRNA NA coding protein psRNATarget
XM_008672660.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **||||||||||||||||||||||
targets:2212   GACCUUGUUCGUUUGUGCCGGAUU   2235

0.0 PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020548714.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **||||||||||||||||||||||
targets:2261   GACCUUGUUCGUUUGUGCCGGAUU   2284

0.0 PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X5, mRNA NA coding protein psRNATarget
BT041125.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|=||||||||||||||=||||||
targets:1262   GGUCUUGUUCGUUUGUGUCGGAUU   1285

1.5 Zea mays full-length cDNA clone ZM_BFc0177J19 mRNA, complete cds NA coding protein psRNATarget
LQ238065.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **|||||||||||||||=||||||
targets:7   AACCUUGUUCGUUUGUGUCGGAUU   30

1.5 Sequence 4060 from Patent EP2985353 NA coding protein psRNATarget
JB166396.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **|||||||||||||||=||||||
targets:7   AACCUUGUUCGUUUGUGUCGGAUU   30

1.5 Sequence 4060 from Patent EP2559767 NA coding protein psRNATarget
HI405935.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **|||||||||||||||=||||||
targets:7   AACCUUGUUCGUUUGUGUCGGAUU   30

1.5 Sequence 4060 from Patent EP2074227 NA coding protein psRNATarget
JB166393.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|*|||||||||||||||||||||
targets:11   GGGCUUGUUCGUUUGUGCCGGAUU   34

0.0 Sequence 4057 from Patent EP2559767 NA coding protein psRNATarget
LQ238062.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|*|||||||||||||||||||||
targets:11   GGGCUUGUUCGUUUGUGCCGGAUU   34

0.0 Sequence 4057 from Patent EP2985353 NA coding protein psRNATarget
HI405932.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|*|||||||||||||||||||||
targets:11   GGGCUUGUUCGUUUGUGCCGGAUU   34

0.0 Sequence 4057 from Patent EP2074227 NA coding protein psRNATarget
JB167699.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|*|||||||||||||||||||||
targets:12   GGGCUUGUUCGUUUGUGCCGGAUU   35

0.0 Sequence 5363 from Patent EP2559767 NA coding protein psRNATarget
HI407238.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|*|||||||||||||||||||||
targets:12   GGGCUUGUUCGUUUGUGCCGGAUU   35

0.0 Sequence 5363 from Patent EP2074227 NA coding protein psRNATarget
LQ239368.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|*|||||||||||||||||||||
targets:12   GGGCUUGUUCGUUUGUGCCGGAUU   35

0.0 Sequence 5363 from Patent EP2985353 NA coding protein psRNATarget
BT035367.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **|||||||||||||||=||||||
targets:1245   AACCUUGUUCGUUUGUGUCGGAUU   1268

1.5 Zea mays full-length cDNA clone ZM_BFb0057L05 mRNA, complete cds NA coding protein psRNATarget
NM_001138328.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **|||||||||||||||=||||||
targets:1245   AACCUUGUUCGUUUGUGUCGGAUU   1268

1.5 Zea mays uncharacterized LOC100193173 (LOC100193173), mRNA NA coding protein psRNATarget
EU972216.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **|||||||||||||||=||||||
targets:1263   AACCUUGUUCGUUUGUGUCGGAUU   1286

1.5 Zea mays clone 377576 mRNA sequence NA coding protein psRNATarget
EU948349.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||*|||||||||
targets:476   GGCCUUGUUCGUUUAUGCCGGAUU   499

1.5 Zea mays clone 373385 mRNA sequence NA coding protein psRNATarget
FJ805752.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||||||*||
targets:1027   GGCCUUGUUCGUUUGUGCCGGUUU   1050

1.5 Zea mays DRE-binding protein 4 (DBP4) mRNA, complete cds NA coding protein psRNATarget
FJ805752.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|=|||*||||||||||=||||||
targets:1086   GGUCUUAUUCGUUUGUGUCGGAUU   1109

2.5 Zea mays DRE-binding protein 4 (DBP4) mRNA, complete cds NA coding protein psRNATarget
NM_001177010.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *||||||||||||||||||||*||
targets:1027   GGCCUUGUUCGUUUGUGCCGGUUU   1050

1.5 Zea mays DRE-binding protein 4 (DBP4), mRNA NA coding protein psRNATarget
NM_001177010.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|=|||*||||||||||=||||||
targets:1086   GGUCUUAUUCGUUUGUGUCGGAUU   1109

2.5 Zea mays DRE-binding protein 4 (DBP4), mRNA NA coding protein psRNATarget
XM_008649755.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||*|||||||||
targets:895   GGCCUUGUUCGUUUCUGCCGGAUU   918

1.5 PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (cl16339_1), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020539029.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|||||||||||||*|||||||||
targets:1012   GGCCUUGUUCGUUUCUGCCGGAUU   1035

1.5 PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (cl16339_1), transcript variant X1, mRNA NA coding protein psRNATarget
BT083852.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|*||||||||||||||=||||||
targets:354   GGACUUGUUCGUUUGUGUCGGAUU   377

1.5 Zea mays full-length cDNA clone ZM_BFb0047A08 mRNA, complete cds NA coding protein psRNATarget
XM_020547654.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **|=|||||||||||||=||||||
targets:4340   GACUUUGUUCGUUUGUGUCGGAUU   4363

1.5 PREDICTED: Zea mays uncharacterized LOC100279517 (LOC100279517), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008676360.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|*||||||||||||||=||||||
targets:1822   GGGCUUGUUCGUUUGUGUCGGAUU   1845

1.5 PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008676377.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|*||||||||||||||=||||||
targets:1896   GGGCUUGUUCGUUUGUGUCGGAUU   1919

1.5 PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008676366.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|*||||||||||||||=||||||
targets:1914   GGGCUUGUUCGUUUGUGUCGGAUU   1937

1.5 PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X4, mRNA NA coding protein psRNATarget
XM_008676374.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|*||||||||||||||=||||||
targets:1990   GGGCUUGUUCGUUUGUGUCGGAUU   2013

1.5 PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X3, mRNA NA coding protein psRNATarget
BT017859.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **||||||||||||*|||||||||
targets:934   GACCUUGUUCGUUUCUGCCGGAUU   957

1.5 Zea mays clone EL01N0511E01.c mRNA sequence NA coding protein psRNATarget
XM_020551571.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **||||||||||||*|||||||||
targets:1223   GACCUUGUUCGUUUCUGCCGGAUU   1246

1.5 PREDICTED: Zea mays protein recA (LOC100282426), transcript variant X2, mRNA NA coding protein psRNATarget
BT062375.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **||||||||||||*|||||||||
targets:1515   GACCUUGUUCGUUUCUGCCGGAUU   1538

1.5 Zea mays full-length cDNA clone ZM_BFb0287P21 mRNA, complete cds NA coding protein psRNATarget
BT085007.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **||||||||||||*|||||||||
targets:1514   GACCUUGUUCGUUUCUGCCGGAUU   1537

1.5 Zea mays full-length cDNA clone ZM_BFb0224O05 mRNA, complete cds NA coding protein psRNATarget
NM_001352179.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **||||||||||||*|||||||||
targets:1514   GACCUUGUUCGUUUCUGCCGGAUU   1537

1.5 Zea mays protein recA (LOC100282426), mRNA NA coding protein psRNATarget
XM_008678176.2
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  **||||||||||||*|||||||||
targets:1538   GACCUUGUUCGUUUCUGCCGGAUU   1561

1.5 PREDICTED: Zea mays protein recA (LOC100282426), transcript variant X1, mRNA NA coding protein psRNATarget
AY107839.1
ncRNA:24   ACGGAACAAGCAAACACGGCCUAA   1
  *|*|||||||||||||||||||*|
targets:1177   AGGCUUGUUCGUUUGUGCCGGANU   1200

1.5 Zea mays PCO143146 mRNA sequence NA coding protein psRNATarget
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