Search result

BaseInfo

ncRNA ID novel_zma_miR4552
Species Zea mays
Class miRNA
Genome position Chr3:76588179-76588268 [-]
Reference genome RefGen_v4
Source SRR2287161;SRR2089708
Length 24
Mature sequence(if miRNA) 67 - UAAACUAAGAACGUGGGUACUCAC - 90
Stem-loop(if miRNA) --UA    -                        CAACAAAGCCAU
    AACU AAGAACGUGGGUACUCACGUUCUU            G
    |||| ||||||||||||||||||||||||            A
    UUGA UUCUUGCACCCAUGGGUGCAAGAA            A
CCAA    A                        UUAACUCAAUUC
Stem-loop sequence UAAACUAAGAACGUGGGUACUCACGUUCUUCAACAAAGCCAUGAACUUAACUCAAUUAAGAACGUGGGUACCCACGUUCUUAAGUUAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403217.1
ncRNA:24   CACUCAUGGGUGCAAGAAUCAAAU   1
  |||=*||||||=||||||||||||
targets:59   GUGGAUACCCAUGUUCUUAGUUUA   82

1.5 Sequence 1342 from Patent EP2074227 NA coding protein psRNATarget
LQ235347.1
ncRNA:24   CACUCAUGGGUGCAAGAAUCAAAU   1
  |||=*||||||=||||||||||||
targets:59   GUGGAUACCCAUGUUCUUAGUUUA   82

1.5 Sequence 1342 from Patent EP2985353 NA coding protein psRNATarget
JB163678.1
ncRNA:24   CACUCAUGGGUGCAAGAAUCAAAU   1
  |||=*||||||=||||||||||||
targets:59   GUGGAUACCCAUGUUCUUAGUUUA   82

1.5 Sequence 1342 from Patent EP2559767 NA coding protein psRNATarget