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BaseInfo

ncRNA ID novel_zma_miR4546
Species Zea mays
Class miRNA
Genome position Chr3:151743506-151743556 [-]
Reference genome RefGen_v4
Source SRR2287161
Length 24
Mature sequence(if miRNA) 28 - CGGUGAACUGUACAUCGGCAACAA - 51
Stem-loop(if miRNA) --       CU    A       CAA
  CGGUGAA  GUAC UCGGCAA   C
  |||||||  |||| |||||||
  GCUAUUU  CAUG AGCCGUU   U
GG       UU    -       UCU
Stem-loop sequence CGGUGAACUGUACAUCGGCAACAACUUCUUUGCCGAGUACUUUUUAUCGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020545810.1
ncRNA:24   AACAACGGCUACAUGUCAAGUGGC   1
  **||||||||||||||||||||=|
targets:372   CCGUUGCCGAUGUACAGUUCACUG   395

1.5 PREDICTED: Zea mays zinc finger BED domain-containing protein RICESLEEPER 2-like (LOC109943047), mRNA NA coding protein psRNATarget