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BaseInfo

ncRNA ID novel_zma_miR4538
Species Zea mays
Class miRNA
Genome position Chr3:211037498-211037575 [-]
Reference genome RefGen_v4
Source SRR2287161;SRR2287163;SRR2089702
Length 21
Mature sequence(if miRNA) 58 - UGAAUGCUGCAACUAAAGAAU - 78
Stem-loop(if miRNA) --                     U            UUU
  UGAAUGCUGCAACUAAAGAAU AAAUAAUCAUUA   U
  ||||||||||||||||||||| ||||||||||||
  ACUUACGACGUUGAUUUCUUA UUUAUUAGUAAU   A
GG                     U            CUG
Stem-loop sequence UGAAUGCUGCAACUAAAGAAUUAAAUAAUCAUUAUUUUAGUCUAAUGAUUAUUUUAUUCUUUAGUUGCAGCAUUCAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020553457.1
ncRNA:21   UAAGAAAUCAACGUCGUAAGU   1
  |||*|||||||||||||||=|
targets:1573   AUUAUUUAGUUGCAGCAUUUA   1593

2.5 PREDICTED: Zea mays uncharacterized LOC100381623 (LOC100381623), transcript variant X1, mRNA NA coding protein psRNATarget