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BaseInfo

ncRNA ID novel_zma_miR4534
Species Zea mays
Class miRNA
Genome position Chr3:211037503-211037580 [+]
Reference genome RefGen_v4
Source SRR2287161;SRR2287163;SRR2089702;SRR1583942
Length 21
Mature sequence(if miRNA) 1 - UGAAUGCUGCAACUAAAGAAU - 21
Stem-loop(if miRNA) --                     A            GAC
  UGAAUGCUGCAACUAAAGAAU AAAUAAUCAUUA   U
  ||||||||||||||||||||| ||||||||||||
  ACUUACGACGUUGAUUUCUUA UUUAUUAGUAAU   A
GG                     A            AAA
Stem-loop sequence UGAAUGCUGCAACUAAAGAAUAAAAUAAUCAUUAGACUAAAAUAAUGAUUAUUUAAUUCUUUAGUUGCAGCAUUCAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020553457.1
ncRNA:21   UAAGAAAUCAACGUCGUAAGU   1
  |||*|||||||||||||||=|
targets:1573   AUUAUUUAGUUGCAGCAUUUA   1593

2.5 PREDICTED: Zea mays uncharacterized LOC100381623 (LOC100381623), transcript variant X1, mRNA NA coding protein psRNATarget