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BaseInfo

ncRNA ID	novel_zma_miR4531
Species	Zea mays
Class	miRNA
Genome position	Chr1:50779570-50779741 [+]
Reference genome	RefGen_v4
Source	SRR1618882
Length	21
Mature sequence(if miRNA)	152 - ACCUAGAAACCAAACACCCCC - 172
Stem-loop(if miRNA)	--                  G                 CCAUUUUAAUCCAUUG              G      AAG    A   U    AU   GGGUGUUUGGUUUCUGGG ACUAAUUUUUAGUCCCU                UAGUCCCUAAAUUG CAAACA   GAAU AAA AGAG  A   |||||||||||||||||| |||||||||||||||||                |||||||||||||| ||||||   |||| ||| ||||  A   CCCACAAACCAAAGAUCC UGAUUAAAAAUCAGGGA                AUCAGGGAUUUAAC GUUUGU   CUUG UUU UCUC  U CC                  A                 --------------AA              G      GUA    A   -    CC
Stem-loop sequence	GGGUGUUUGGUUUCUGGGGACUAAUUUUUAGUCCCUCCAUUUUAAUCCAUUGUAGUCCCUAAAUUGGCAAACAAAGGAAUAAAAUAGAGAUAAUCCCUCUUUUAGUUCAUGUGUUUGGCAAUUUAGGGACUAAAAGGGACUAAAAAUUAGUACCUAGAAACCAAACACCCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167198.1	ncRNA:20   CCCCACAAACCAAAGAUCCA   1   |||||||||||||||||||| targets:1   GGGGUGUUUGGUUUCUAGGU   20 Target Full Sequence	0.0	Sequence 4862 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238870.1	ncRNA:20   CCCCACAAACCAAAGAUCCA   1   |||||||||||||||||||| targets:1   GGGGUGUUUGGUUUCUAGGU   20 Target Full Sequence	0.0	Sequence 4865 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238867.1	ncRNA:20   CCCCACAAACCAAAGAUCCA   1   |||||||||||||||||||| targets:1   GGGGUGUUUGGUUUCUAGGU   20 Target Full Sequence	0.0	Sequence 4862 from Patent EP2985353	NA	coding protein	psRNATarget
HI406740.1	ncRNA:20   CCCCACAAACCAAAGAUCCA   1   |||||||||||||||||||| targets:1   GGGGUGUUUGGUUUCUAGGU   20 Target Full Sequence	0.0	Sequence 4865 from Patent EP2074227	NA	coding protein	psRNATarget
HI406737.1	ncRNA:20   CCCCACAAACCAAAGAUCCA   1   |||||||||||||||||||| targets:1   GGGGUGUUUGGUUUCUAGGU   20 Target Full Sequence	0.0	Sequence 4862 from Patent EP2074227	NA	coding protein	psRNATarget
JB167201.1	ncRNA:20   CCCCACAAACCAAAGAUCCA   1   |||||||||||||||||||| targets:1   GGGGUGUUUGGUUUCUAGGU   20 Target Full Sequence	0.0	Sequence 4865 from Patent EP2559767	NA	coding protein	psRNATarget
BT087095.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:551   GGGGGUGUUUGGUUUCUAGGA   571 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFa0069E04 mRNA, complete cds	NA	coding protein	psRNATarget
EU942443.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:461   GGGGGUGUUUGGUUUCUAGGG   481 Target Full Sequence	1.0	Zea mays clone 1501876 mRNA sequence	NA	coding protein	psRNATarget
EZ052166.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:748   GGGGGUGUUUGGUUUCUAGGG   768 Target Full Sequence	1.0	TSA: Zea mays contig53286, mRNA sequence	NA	coding protein	psRNATarget
XM_020553397.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:548   GGGGGUGUUUGGUUUCUAGGG   568 Target Full Sequence	1.0	PREDICTED: Zea mays SANT/MYB protein (LOC100284980), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT088053.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *|||||||||||||||||||| targets:801   CGGGGUGUUUGGUUUCUAGGU   821 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0380J10 mRNA, complete cds	NA	coding protein	psRNATarget
DQ244473.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:963   GGGGGUGUUUGGUUUCUAGGG   983 Target Full Sequence	1.0	Zea mays clone 8025 mRNA sequence	NA	coding protein	psRNATarget
BT036582.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:811   GGGGGUGUUUGGUUUCUAGGG   831 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0124H18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001139183.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:811   GGGGGUGUUUGGUUUCUAGGG   831 Target Full Sequence	1.0	Zea mays hypothetical protein (LOC100194130), mRNA	NA	coding protein	psRNATarget
NM_001313850.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:1135   GGGGGUGUUUGGUUUCUAGGG   1155 Target Full Sequence	1.0	Zea mays voltage-gated potassium channel beta subunit (LOC100282429), mRNA	NA	coding protein	psRNATarget
BT088358.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:1135   GGGGGUGUUUGGUUUCUAGGG   1155 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0155C19 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008650759.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:1133   GGGGGUGUUUGGUUUCUAGGG   1153 Target Full Sequence	1.0	PREDICTED: Zea mays MADS-box transcription factor 30 (LOC103629660), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008650758.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:1142   GGGGGUGUUUGGUUUCUAGGG   1162 Target Full Sequence	1.0	PREDICTED: Zea mays MADS-box transcription factor 30 (LOC103629660), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008650753.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:1145   GGGGGUGUUUGGUUUCUAGGG   1165 Target Full Sequence	1.0	PREDICTED: Zea mays MADS-box transcription factor 30 (LOC103629660), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008650754.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:1151   GGGGGUGUUUGGUUUCUAGGG   1171 Target Full Sequence	1.0	PREDICTED: Zea mays MADS-box transcription factor 30 (LOC103629660), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT039671.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *|||||||||||||||||||| targets:1059   CGGGGUGUUUGGUUUCUAGGU   1079 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0037P09 mRNA, complete cds	NA	coding protein	psRNATarget
EU962491.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *|||||||||||||||||||| targets:1119   CGGGGUGUUUGGUUUCUAGGU   1139 Target Full Sequence	0.0	Zea mays clone 243115 mRNA sequence	NA	coding protein	psRNATarget
BT087555.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *|||||||||||||||||||| targets:1173   CGGGGUGUUUGGUUUCUAGGU   1193 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0108F07 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001136807.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *|||||||||||||||||||| targets:1219   CGGGGUGUUUGGUUUCUAGGU   1239 Target Full Sequence	0.0	Zea mays Protein LIKE COV 2 (LOC100191373), mRNA	NA	coding protein	psRNATarget
BT033446.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *|||||||||||||||||||| targets:1219   CGGGGUGUUUGGUUUCUAGGU   1239 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0157F18 mRNA, complete cds	NA	coding protein	psRNATarget
EU956227.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:1238   GGGGGUGUUUGGUUUCUAGGG   1258 Target Full Sequence	1.0	Zea mays clone 1559264 mRNA sequence	NA	coding protein	psRNATarget
XM_008655999.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *|||||||||||||||||||| targets:1160   CGGGGUGUUUGGUUUCUAGGU   1180 Target Full Sequence	0.0	PREDICTED: Zea mays Protein LIKE COV 2 (LOC100191373), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT085047.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:1189   GGGGGUGUUUGGUUUCUAGGG   1209 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0232J05 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020542419.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:2140   GGGGGUGUUUGGUUUCUAGGG   2160 Target Full Sequence	1.0	PREDICTED: Zea mays ADP,ATP carrier protein 2, chloroplastic (LOC103637385), mRNA	NA	coding protein	psRNATarget
XM_020545045.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||||||||||||||||||* targets:1918   GGGGGUGUUUGGUUUCUAGGG   1938 Target Full Sequence	1.0	PREDICTED: Zea mays CAB2 (LOC100281582), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EZ111881.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   |||||||||||||||=||||* targets:80   GGGGGUGUUUGGUUUUUAGGG   100 Target Full Sequence	2.5	TSA: Zea mays contig47542, mRNA sequence	NA	coding protein	psRNATarget
EU943837.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   |||||||||||||||*||||| targets:390   GGGGGUGUUUGGUUUAUAGGU   410 Target Full Sequence	1.5	Zea mays clone 1689635 mRNA sequence	NA	coding protein	psRNATarget
JB163508.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *|||||||||||||||||||* targets:56   AGGGGUGUUUGGUUUCUAGGG   76 Target Full Sequence	1.0	Sequence 1172 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235177.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *|||||||||||||||||||* targets:56   AGGGGUGUUUGGUUUCUAGGG   76 Target Full Sequence	1.0	Sequence 1172 from Patent EP2985353	NA	coding protein	psRNATarget
HI403047.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *|||||||||||||||||||* targets:56   AGGGGUGUUUGGUUUCUAGGG   76 Target Full Sequence	1.0	Sequence 1172 from Patent EP2074227	NA	coding protein	psRNATarget
EZ060524.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   |||||||||||||||||||** targets:40   GGGGGUGUUUGGUUUCUAGUG   60 Target Full Sequence	2.5	TSA: Zea mays contig61646, mRNA sequence	NA	coding protein	psRNATarget
XM_020543841.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *|||||||||||||||||||* targets:916   AGGGGUGUUUGGUUUCUAGGG   936 Target Full Sequence	1.0	PREDICTED: Zea mays lo1 pI allergen homolog 1 (lop1), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU956677.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   |||||||||||||||||||** targets:2008   GGGGGUGUUUGGUUUCUAGAG   2028 Target Full Sequence	2.5	Zea mays clone 1570443 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020550311.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *|||||||||||||||||||* targets:2443   AGGGGUGUUUGGUUUCUAGGG   2463 Target Full Sequence	1.0	PREDICTED: Zea mays zinc finger CCCH domain-containing protein 67-like (LOC103650585), mRNA	NA	coding protein	psRNATarget
XM_020547858.1	ncRNA:21   CC-CCCACAAACCAAAGAUCCA   1   ||-||||||||||||||||||* targets:1536   GGUGGGUGUUUGGUUUCUAGGG   1557 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC100382535 (LOC100382535), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020549827.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *||||||||||||||=||||* targets:1843   UGGGGUGUUUGGUUUUUAGGG   1863 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC100381696), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008682706.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *||||||||||||||=||||* targets:2251   AGGGGUGUUUGGUUUUUAGGG   2271 Target Full Sequence	2.5	PREDICTED: Zea mays protein phosphatase 2C (LOC100286089), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008674864.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *||||||||||||||=||||* targets:2218   UGGGGUGUUUGGUUUUUAGGG   2238 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC100381696), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT062019.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *||||||||||||||=||||* targets:2277   UGGGGUGUUUGGUUUUUAGGG   2297 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0206L01 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174508.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *||||||||||||||=||||* targets:2277   UGGGGUGUUUGGUUUUUAGGG   2297 Target Full Sequence	2.5	Zea mays hypothetical protein (LOC100381696), mRNA	NA	coding protein	psRNATarget
EZ061563.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   |||||||||||||||*||||* targets:316   GGGGGUGUUUGGUUUAUAGGG   336 Target Full Sequence	2.5	TSA: Zea mays contig62685, mRNA sequence	NA	coding protein	psRNATarget
EU941753.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||*|||||||||||||||* targets:1   GGGGAUGUUUGGUUUCUAGGG   21 Target Full Sequence	2.0	Zea mays clone 1469712 mRNA sequence	NA	coding protein	psRNATarget
BT018349.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||*|||||||||||||||* targets:556   GGGGAUGUUUGGUUUCUAGGG   576 Target Full Sequence	2.0	Zea mays clone EL01T0403E10.c mRNA sequence	NA	coding protein	psRNATarget
BT016605.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   |||||||||||||||*||||* targets:952   GGGGGUGUUUGGUUUGUAGGG   972 Target Full Sequence	2.5	Zea mays clone Contig438 mRNA sequence	NA	coding protein	psRNATarget
XM_008667360.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   |*||||||||||||||||||* targets:1142   GUGGGUGUUUGGUUUCUAGGG   1162 Target Full Sequence	1.0	PREDICTED: Zea mays GNAT transcription factor (LOC103644167), mRNA	NA	coding protein	psRNATarget
NM_001112512.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   |||||*||||||||||||||* targets:1541   GGGGGCGUUUGGUUUCUAGGA   1561 Target Full Sequence	2.0	Zea mays Aldose reductase (pco147797a), mRNA	NA	coding protein	psRNATarget
XM_008654984.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   |||||||||||||||*||||* targets:2902   GGGGGUGUUUGGUUUGUAGGG   2922 Target Full Sequence	2.5	PREDICTED: Zea mays putative mixed-linked glucan synthase 1 (LOC103633281), mRNA	NA	coding protein	psRNATarget
XM_020546796.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||*|||||||||||||||* targets:3400   GGGGAUGUUUGGUUUCUAGGG   3420 Target Full Sequence	2.0	PREDICTED: Zea mays F-box/LRR-repeat protein 15-like (LOC103643599), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020546795.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||*|||||||||||||||* targets:3475   GGGGAUGUUUGGUUUCUAGGG   3495 Target Full Sequence	2.0	PREDICTED: Zea mays F-box/LRR-repeat protein 15-like (LOC103643599), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546794.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||*|||||||||||||||* targets:3525   GGGGAUGUUUGGUUUCUAGGG   3545 Target Full Sequence	2.0	PREDICTED: Zea mays F-box/LRR-repeat protein 15-like (LOC103643599), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020546793.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||||*|||||||||||||||* targets:3562   GGGGAUGUUUGGUUUCUAGGG   3582 Target Full Sequence	2.0	PREDICTED: Zea mays F-box/LRR-repeat protein 15-like (LOC103643599), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ235170.1	ncRNA:20   CCCCACAAACCAAAGAUCCA   1   *||||||||||||||||||* targets:1   UGGGUGUUUGGUUUCUAGGG   20 Target Full Sequence	1.0	Sequence 1165 from Patent EP2985353	NA	coding protein	psRNATarget
HI403040.1	ncRNA:20   CCCCACAAACCAAAGAUCCA   1   *||||||||||||||||||* targets:1   UGGGUGUUUGGUUUCUAGGG   20 Target Full Sequence	1.0	Sequence 1165 from Patent EP2074227	NA	coding protein	psRNATarget
JB163501.1	ncRNA:20   CCCCACAAACCAAAGAUCCA   1   *||||||||||||||||||* targets:1   UGGGUGUUUGGUUUCUAGGG   20 Target Full Sequence	1.0	Sequence 1165 from Patent EP2559767	NA	coding protein	psRNATarget
EU961152.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   |*|||||||||||||||||** targets:535   GAGGGUGUUUGGUUUCUAGAG   555 Target Full Sequence	2.5	Zea mays clone 232918 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001150110.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   |*|||||||||||||||||** targets:535   GAGGGUGUUUGGUUUCUAGAG   555 Target Full Sequence	2.5	Zea mays hypothetical protein (LOC103639532), mRNA	NA	coding protein	psRNATarget
XM_020542840.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *|*|||||||||||||||||* targets:968   AGAGGUGUUUGGUUUCUAGGG   988 Target Full Sequence	2.0	PREDICTED: Zea mays hypothetical protein (LOC103636172), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001112602.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *||||||||||||||*||||* targets:1095   AGGGGUGUUUGGUUUAUAGGG   1115 Target Full Sequence	2.5	Zea mays ferric-chelate reductase (NADH)2 (fcr2), mRNA	NA	coding protein	psRNATarget
EU965238.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *||||||||||||||*||||* targets:1160   AGGGGUGUUUGGUUUAUAGGG   1180 Target Full Sequence	2.5	Zea mays clone 284715 protein COQ10 A mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156492.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *||||||||||||||*||||* targets:1160   AGGGGUGUUUGGUUUAUAGGG   1180 Target Full Sequence	2.5	Zea mays protein COQ10 A (LOC100283591), mRNA	NA	coding protein	psRNATarget
EU967664.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *||||||||||||||*||||* targets:1095   AGGGGUGUUUGGUUUAUAGGG   1115 Target Full Sequence	2.5	Zea mays clone 305169 NADH-cytochrome b5 reductase mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153051.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *||||||*||||||||||||* targets:783   AGGGGUGCUUGGUUUCUAGGG   803 Target Full Sequence	2.0	Zea mays NAD(P)-binding Rossmann-fold superfamily protein (LOC100280114), mRNA	NA	coding protein	psRNATarget
BT055601.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *||||||*||||||||||||* targets:783   AGGGGUGCUUGGUUUCUAGGG   803 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0063A22 mRNA, complete cds	NA	coding protein	psRNATarget
EU957896.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *||||||||||||||*||||* targets:1239   AGGGGUGUUUGGUUUAUAGGG   1259 Target Full Sequence	2.5	Zea mays clone 1630391 mRNA sequence	NA	coding protein	psRNATarget
BT083492.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *||||||||||||||*||||* targets:645   AGGGGUGUUUGGUUUAUAGGG   665 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0003B18 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008646834.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   *||||*||||||||||||||* targets:4243   AGGGGAGUUUGGUUUCUAGGG   4263 Target Full Sequence	2.0	PREDICTED: Zea mays hypothetical protein (LOC103626423), mRNA	NA	coding protein	psRNATarget
XM_008650489.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   **|||||||||||||||||** targets:1603   UAGGGUGUUUGGUUUCUAGUA   1623 Target Full Sequence	2.5	PREDICTED: Zea mays putative glycerol-3-phosphate transporter 5 (LOC103629335), mRNA	NA	coding protein	psRNATarget
BT083561.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   |*|||||||||*||||||||* targets:173   GAGGGUGUUUGAUUUCUAGGA   193 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0012F08 mRNA, complete cds	NA	coding protein	psRNATarget
EZ052038.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   |*|||||||||*||||||||* targets:170   GAGGGUGUUUGAUUUCUAGGA   190 Target Full Sequence	2.5	TSA: Zea mays contig53158, mRNA sequence	NA	coding protein	psRNATarget
NM_001154575.2	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||*|*|||||||||||||||* targets:1857   GGAGAUGUUUGGUUUCUAGGG   1877 Target Full Sequence	3.0	Zea mays uncharacterized LOC100281656 (si605087c09), mRNA	NA	coding protein	psRNATarget
EU957463.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   ||*|*|||||||||||||||* targets:1858   GGAGAUGUUUGGUUUCUAGGG   1878 Target Full Sequence	3.0	Zea mays clone 1593330 selenium-binding protein-like mRNA, complete cds	NA	coding protein	psRNATarget
NM_001143444.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   **|||||*|||||||||*||| targets:739   CCGGGUGCUUGGUUUCUUGGU   759 Target Full Sequence	2.5	Zea mays ubiquitin carrier protein 7 (LOC100217074), mRNA	NA	coding protein	psRNATarget
BT037879.1	ncRNA:21   CCCCCACAAACCAAAGAUCCA   1   **|||||*|||||||||*||| targets:739   CCGGGUGCUUGGUUUCUUGGU   759 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0200I15 mRNA, complete cds	NA	coding protein	psRNATarget