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BaseInfo

ncRNA ID novel_zma_miR4520
Species Zea mays
Class miRNA
Genome position Chr2:9785806-9785945 [-]
Reference genome RefGen_v4
Source SRR2287161
Length 23
Mature sequence(if miRNA) 1 - GCGAGAGGCUGUAAAAGAAGAUG - 23
Stem-loop(if miRNA) --   -        -  GG   A       -  A   U            U   AAAAUAAAUU       --G  UA
  UCU CUUUUACA CC  CUC CAUCUAU AC UGA AGUCUAUAGAAA AUA          AUUAAAA   GU  A
  ||| |||||||| ||  ||| ||||||| || ||| |||||||||||| |||          |||||||   ||
  AGA GAAAAUGU GG  GAG GUAGGUG UG ACU UCGGGUGUUUUU UAU          UAGUUUU   CG  G
GU   A        C  -A   C       G  A   U            U   ----------       AAA  UU
Stem-loop sequence UCUCUUUUACACCGGCUCACAUCUAUACAUGAUAGUCUAUAGAAAUAUAAAAAUAAAUUAUUAAAAGGUUAAGUUGCAAAUUUUGAUUAUUUUUUUGUGGGCUUUCAAGUGGUGGAUGCGAGAGGCUGUAAAAGAAGAUG