Search result

BaseInfo

ncRNA ID novel_zma_miR4519
Species Zea mays
Class miRNA
Genome position Chr2:10174743-10174845 [-]
Reference genome RefGen_v4
Source SRR2287161;SRR5099742;SRR5105959
Length 21
Mature sequence(if miRNA) 1 - CUUUAAGAUUGAUGGGGUGGA - 21
Stem-loop(if miRNA) --                                A   UAAAGCAAUAGAAC
  CACCCCAUCAAUCUUAAAGUAAUAGAACACCG UCU              A
  |||||||||||||||||||||||||||||||| |||
  GUGGGGUAGUUAGAAUUUCGUUGUCUUGUGGC UCG              G
AG                                -   GUGAAGAGACGUCC
Stem-loop sequence CACCCCAUCAAUCUUAAAGUAAUAGAACACCGAUCUUAAAGCAAUAGAACAGCCUGCAGAGAAGUGGCUCGGUGUUCUGUUGCUUUAAGAUUGAUGGGGUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020547872.1
ncRNA:21   AGGUGGGGUAGUUAGAAUUUC   1
  |||||||||||||||||||||
targets:3427   UCCACCCCAUCAAUCUUAAAG   3447

0.0 PREDICTED: Zea mays accumulation of photosystem one1 (LOC100383040), transcript variant X4, mRNA NA coding protein psRNATarget