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BaseInfo

ncRNA ID novel_zma_miR4516
Species Zea mays
Class miRNA
Genome position Chr7:15204592-15204663 [-]
Reference genome RefGen_v4
Source SRR1583941
Length 23
Mature sequence(if miRNA) 1 - AAAAAGGUGGGUGCGUUUGUCAG - 23
Stem-loop(if miRNA) --       U      G  C  C   AAAU      U
  GACAAAC UAUCUA CU UU CAU    ACUUUA U
  ||||||| |||||| || || |||    ||||||
  CUGUUUG GUGGGU GA AA GUA    UGGAGU C
GA       C      G  A  A   --CU      A
Stem-loop sequence GACAAACUUAUCUAGCUCUUCCAUAAAUACUUUAUUCAUGAGGUUCAUGAAAAAGGUGGGUGCGUUUGUCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ241488.1
ncRNA:23   GACUGUUUGCGUGGGUGGAAAAA   1
  |||||||||||||||=|||||||
targets:125   CUGACAAACGCACCCGCCUUUUU   147

1.5 Sequence 7483 from Patent EP2985353 NA coding protein psRNATarget
HI409358.1
ncRNA:23   GACUGUUUGCGUGGGUGGAAAAA   1
  |||||||||||||||=|||||||
targets:125   CUGACAAACGCACCCGCCUUUUU   147

1.5 Sequence 7483 from Patent EP2074227 NA coding protein psRNATarget
JB169819.1
ncRNA:23   GACUGUUUGCGUGGGUGGAAAAA   1
  |||||||||||||||=|||||||
targets:125   CUGACAAACGCACCCGCCUUUUU   147

1.5 Sequence 7483 from Patent EP2559767 NA coding protein psRNATarget