Search result

BaseInfo

ncRNA ID novel_zma_miR4514
Species Zea mays
Class miRNA
Genome position Chr2:15879043-15879174 [-]
Reference genome RefGen_v4
Source SRR2287161
Length 24
Mature sequence(if miRNA) 1 - CGGCACAAACGAACAAGGCCUAAU - 24
Stem-loop(if miRNA) --A                    U     --CACC      UAUUUCA   AAUCAAAGUUUAUAUAAA
   AGGCCUUGUUCGUUUGUGUC GAUUG      CGGAAU       GCU                  U
   |||||||||||||||||||| |||||      ||||||       |||
   UCCGGAACAAGCAAACACGG CUAAC      GCCUUG       AGG                  U
UAA                    C     CACCCA      ----CUA   AUUGGCCUAACGAAGAGA
Stem-loop sequence AAGGCCUUGUUCGUUUGUGUCUGAUUGCACCCGGAAUUAUUUCAGCUAAUCAAAGUUUAUAUAAAUUAGAGAAGCAAUCCGGUUAGGAAUCGUUCCGACCCACCAAUCCGGCACAAACGAACAAGGCCUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB166406.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||||||||||||||||||||||
targets:4   AUUAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4070 from Patent EP2559767 NA coding protein psRNATarget
LQ238075.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||||||||||||||||||||||
targets:4   AUUAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4070 from Patent EP2985353 NA coding protein psRNATarget
HI405945.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||||||||||||||||||||||
targets:4   AUUAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4070 from Patent EP2074227 NA coding protein psRNATarget
HI405804.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||||||||||||||||||||||
targets:8   AUUAGGCCUUGUUCGUUUGUGCCG   31

0.0 Sequence 3929 from Patent EP2074227 NA coding protein psRNATarget
JB166265.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||||||||||||||||||||||
targets:8   AUUAGGCCUUGUUCGUUUGUGCCG   31

0.0 Sequence 3929 from Patent EP2559767 NA coding protein psRNATarget
LQ237934.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||||||||||||||||||||||
targets:8   AUUAGGCCUUGUUCGUUUGUGCCG   31

0.0 Sequence 3929 from Patent EP2985353 NA coding protein psRNATarget
EU953779.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||||||||||||||||||||||
targets:617   AUUAGGCCUUGUUCGUUUGUGCCG   640

0.0 Zea mays clone 1445891 mRNA sequence NA coding protein psRNATarget
FJ805752.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||||||||||||||||||||||
targets:1023   AUUAGGCCUUGUUCGUUUGUGCCG   1046

0.0 Zea mays DRE-binding protein 4 (DBP4) mRNA, complete cds NA coding protein psRNATarget
NM_001177010.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||||||||||||||||||||||
targets:1023   AUUAGGCCUUGUUCGUUUGUGCCG   1046

0.0 Zea mays DRE-binding protein 4 (DBP4), mRNA NA coding protein psRNATarget
LQ238060.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||||=|||||||||||||||||
targets:8   AUUAGGUCUUGUUCGUUUGUGCCG   31

1.0 Sequence 4055 from Patent EP2985353 NA coding protein psRNATarget
HI405930.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||||=|||||||||||||||||
targets:8   AUUAGGUCUUGUUCGUUUGUGCCG   31

1.0 Sequence 4055 from Patent EP2074227 NA coding protein psRNATarget
JB166391.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||||=|||||||||||||||||
targets:8   AUUAGGUCUUGUUCGUUUGUGCCG   31

1.0 Sequence 4055 from Patent EP2559767 NA coding protein psRNATarget
JB166401.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|||||||||||||||||||||||
targets:4   UUUAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4065 from Patent EP2559767 NA coding protein psRNATarget
HI405939.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|||||||||||||||||||||||
targets:4   UUUAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4064 from Patent EP2074227 NA coding protein psRNATarget
LQ238069.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|||||||||||||||||||||||
targets:4   UUUAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4064 from Patent EP2985353 NA coding protein psRNATarget
LQ238070.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|||||||||||||||||||||||
targets:4   UUUAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4065 from Patent EP2985353 NA coding protein psRNATarget
HI405940.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|||||||||||||||||||||||
targets:4   UUUAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4065 from Patent EP2074227 NA coding protein psRNATarget
JB166400.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|||||||||||||||||||||||
targets:4   UUUAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4064 from Patent EP2559767 NA coding protein psRNATarget
EU942882.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|||||||||||||||||||||||
targets:68   CUUAGGCCUUGUUCGUUUGUGCCG   91

0.0 Zea mays clone 1543225 mRNA sequence NA coding protein psRNATarget
LQ238061.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =||||||||||||||||||||=||
targets:7   GUUAGGCCUUGUUCGUUUGUGUCG   30

1.5 Sequence 4056 from Patent EP2985353 NA coding protein psRNATarget
HI405931.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =||||||||||||||||||||=||
targets:7   GUUAGGCCUUGUUCGUUUGUGUCG   30

1.5 Sequence 4056 from Patent EP2074227 NA coding protein psRNATarget
JB166392.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =||||||||||||||||||||=||
targets:7   GUUAGGCCUUGUUCGUUUGUGUCG   30

1.5 Sequence 4056 from Patent EP2559767 NA coding protein psRNATarget
LQ238036.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =||||||||||||||||||||=||
targets:8   GUUAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4031 from Patent EP2985353 NA coding protein psRNATarget
HI405906.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =||||||||||||||||||||=||
targets:8   GUUAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4031 from Patent EP2074227 NA coding protein psRNATarget
JB166367.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =||||||||||||||||||||=||
targets:8   GUUAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4031 from Patent EP2559767 NA coding protein psRNATarget
JB166422.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:6   CUUAGGCCUUGUUCGUUUGUGUCG   29

1.5 Sequence 4086 from Patent EP2559767 NA coding protein psRNATarget
HI405961.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:6   CUUAGGCCUUGUUCGUUUGUGUCG   29

1.5 Sequence 4086 from Patent EP2074227 NA coding protein psRNATarget
LQ238091.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:6   CUUAGGCCUUGUUCGUUUGUGUCG   29

1.5 Sequence 4086 from Patent EP2985353 NA coding protein psRNATarget
HI405934.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:7   CUUAGGCCUUGUUCGUUUGUGUCG   30

1.5 Sequence 4059 from Patent EP2074227 NA coding protein psRNATarget
JB166389.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:7   CUUAGGCCUUGUUCGUUUGUGUCG   30

1.5 Sequence 4053 from Patent EP2559767 NA coding protein psRNATarget
LQ238064.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:7   CUUAGGCCUUGUUCGUUUGUGUCG   30

1.5 Sequence 4059 from Patent EP2985353 NA coding protein psRNATarget
JB166395.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:7   CUUAGGCCUUGUUCGUUUGUGUCG   30

1.5 Sequence 4059 from Patent EP2559767 NA coding protein psRNATarget
HI405928.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:7   CUUAGGCCUUGUUCGUUUGUGUCG   30

1.5 Sequence 4053 from Patent EP2074227 NA coding protein psRNATarget
LQ238058.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:7   CUUAGGCCUUGUUCGUUUGUGUCG   30

1.5 Sequence 4053 from Patent EP2985353 NA coding protein psRNATarget
HI405910.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:8   CUUAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4035 from Patent EP2074227 NA coding protein psRNATarget
HI405905.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:8   CUUAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4030 from Patent EP2074227 NA coding protein psRNATarget
LQ238035.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:8   CUUAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4030 from Patent EP2985353 NA coding protein psRNATarget
LQ238040.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:8   CUUAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4035 from Patent EP2985353 NA coding protein psRNATarget
JB166366.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:8   CUUAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4030 from Patent EP2559767 NA coding protein psRNATarget
JB166371.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:8   CUUAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4035 from Patent EP2559767 NA coding protein psRNATarget
EZ061700.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||=||||||||||||||||
targets:85   UUUAGGCUUUGUUCGUUUGUGCCG   108

1.0 TSA: Zea mays contig62822, mRNA sequence NA coding protein psRNATarget
BT088026.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:1184   CUUAGGCCUUGUUCGUUUGUGUCG   1207

1.5 Zea mays full-length cDNA clone ZM_BFb0366I22 mRNA, complete cds NA coding protein psRNATarget
NM_001196885.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:1184   CUUAGGCCUUGUUCGUUUGUGUCG   1207

1.5 Zea mays Protein kinase superfamily protein (LOC100502407), mRNA NA coding protein psRNATarget
XM_020549216.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|||||=|||||||||||||||||
targets:135   CUUAGGUCUUGUUCGUUUGUGCCG   158

1.0 PREDICTED: Zea mays putative disease resistance protein RGA4 (LOC103649444), mRNA NA coding protein psRNATarget
LQ238066.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||||||||||||||||||||
targets:4   AUAAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4061 from Patent EP2985353 NA coding protein psRNATarget
JB166397.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||||||||||||||||||||
targets:4   AUAAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4061 from Patent EP2559767 NA coding protein psRNATarget
HI405936.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||||||||||||||||||||
targets:4   AUAAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4061 from Patent EP2074227 NA coding protein psRNATarget
JB166394.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||||||||||||||||||||
targets:7   AUAAGGCCUUGUUCGUUUGUGCCG   30

0.0 Sequence 4058 from Patent EP2559767 NA coding protein psRNATarget
LQ238063.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||||||||||||||||||||
targets:7   AUAAGGCCUUGUUCGUUUGUGCCG   30

0.0 Sequence 4058 from Patent EP2985353 NA coding protein psRNATarget
HI405933.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||||||||||||||||||||
targets:7   AUAAGGCCUUGUUCGUUUGUGCCG   30

0.0 Sequence 4058 from Patent EP2074227 NA coding protein psRNATarget
BT068430.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:450   CUUAGGCCUUGUUCGUUUGUGUCG   473

1.5 Zea mays full-length cDNA clone ZM_BFb0175H08 mRNA, complete cds NA coding protein psRNATarget
XM_020539404.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:3422   CUUAGGCCUUGUUCGUUUGUGUCG   3445

1.5 PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020539406.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:3440   CUUAGGCCUUGUUCGUUUGUGUCG   3463

1.5 PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X6, mRNA NA coding protein psRNATarget
XM_020539386.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:3457   CUUAGGCCUUGUUCGUUUGUGUCG   3480

1.5 PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020539392.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:3475   CUUAGGCCUUGUUCGUUUGUGUCG   3498

1.5 PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020539417.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||=||
targets:3725   CUUAGGCCUUGUUCGUUUGUGUCG   3748

1.5 PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X9, mRNA NA coding protein psRNATarget
XM_020550140.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|||||=|||||||||||||||||
targets:3426   CUUAGGUCUUGUUCGUUUGUGCCG   3449

1.0 PREDICTED: Zea mays rust resistance kinase Lr10 (LOC103649884), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008675573.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|||||=|||||||||||||||||
targets:3426   CUUAGGUCUUGUUCGUUUGUGCCG   3449

1.0 PREDICTED: Zea mays rust resistance kinase Lr10 (LOC103649884), transcript variant X2, mRNA NA coding protein psRNATarget
BT035415.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||||||||||||||||||||
targets:1415   AUAAGGCCUUGUUCGUUUGUGCCG   1438

0.0 Zea mays full-length cDNA clone ZM_BFb0059N16 mRNA, complete cds NA coding protein psRNATarget
NM_001138362.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||||||||||||||||||||
targets:1415   AUAAGGCCUUGUUCGUUUGUGCCG   1438

0.0 Zea mays Enhanced ethylene response protein 5 (LOC100193209), mRNA NA coding protein psRNATarget
EU965197.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||||*
targets:1543   CUUAGGCCUUGUUCGUUUGUGCCA   1566

1.0 Zea mays clone 284430 bZIP transcription factor family protein mRNA, complete cds NA coding protein psRNATarget
NM_001156479.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||||||||||||||||||||||*
targets:1543   CUUAGGCCUUGUUCGUUUGUGCCA   1566

1.0 Zea mays bZIP transcription factor family protein (LOC100283578), mRNA NA coding protein psRNATarget
LQ238078.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  *|||-||||||||||||||||||||
targets:3   CUUAAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4073 from Patent EP2985353 NA coding protein psRNATarget
JB166409.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  *|||-||||||||||||||||||||
targets:3   CUUAAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4073 from Patent EP2559767 NA coding protein psRNATarget
HI405948.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  *|||-||||||||||||||||||||
targets:3   CUUAAGGCCUUGUUCGUUUGUGCCG   27

0.0 Sequence 4073 from Patent EP2074227 NA coding protein psRNATarget
JB166412.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  =|||-||=|||||||||||||||||
targets:3   GUUAAGGUCUUGUUCGUUUGUGCCG   27

1.0 Sequence 4076 from Patent EP2559767 NA coding protein psRNATarget
LQ238081.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  =|||-||=|||||||||||||||||
targets:3   GUUAAGGUCUUGUUCGUUUGUGCCG   27

1.0 Sequence 4076 from Patent EP2985353 NA coding protein psRNATarget
HI405951.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  =|||-||=|||||||||||||||||
targets:3   GUUAAGGUCUUGUUCGUUUGUGCCG   27

1.0 Sequence 4076 from Patent EP2074227 NA coding protein psRNATarget
XM_020538690.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  *|||-||||||||||||||||||||
targets:4114   CUUAAGGCCUUGUUCGUUUGUGCCG   4138

0.0 PREDICTED: Zea mays kinesin-like protein KIN-4C (LOC103627710), mRNA NA coding protein psRNATarget
BT017671.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  =|||-||=|||||||||||||||||
targets:865   GUUAAGGUCUUGUUCGUUUGUGCCG   889

1.0 Zea mays clone EL01N0442B02.c mRNA sequence NA coding protein psRNATarget
EZ109082.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|*|||||||||||||||||||||
targets:11   CUAAGGCCUUGUUCGUUUGUGCCG   34

0.0 TSA: Zea mays contig44741, mRNA sequence NA coding protein psRNATarget
AY107168.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|*|||||||||||||||||||||
targets:854   CUGAGGCCUUGUUCGUUUGUGCCG   877

0.0 Zea mays PCO087750 mRNA sequence NA coding protein psRNATarget
LQ238037.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||||||||||||||||||=||
targets:8   GUAAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4032 from Patent EP2985353 NA coding protein psRNATarget
JB166375.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||||||||||||||||||=||
targets:8   GUAAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4039 from Patent EP2559767 NA coding protein psRNATarget
LQ238044.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||||||||||||||||||=||
targets:8   GUAAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4039 from Patent EP2985353 NA coding protein psRNATarget
HI405914.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||||||||||||||||||=||
targets:8   GUAAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4039 from Patent EP2074227 NA coding protein psRNATarget
HI405907.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||||||||||||||||||=||
targets:8   GUAAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4032 from Patent EP2074227 NA coding protein psRNATarget
JB166368.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||||||||||||||||||=||
targets:8   GUAAGGCCUUGUUCGUUUGUGUCG   31

1.5 Sequence 4032 from Patent EP2559767 NA coding protein psRNATarget
AY105834.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||||||||||||||||||=||
targets:752   GUAAGGCCUUGUUCGUUUGUGUCG   775

1.5 Zea mays PCO093864 mRNA sequence NA coding protein psRNATarget
XM_008673797.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||||||||||||||||||=||
targets:834   GUAAGGCCUUGUUCGUUUGUGUCG   857

1.5 PREDICTED: Zea mays uncharacterized LOC100278465 (LOC100278465), transcript variant X2, mRNA NA coding protein psRNATarget
BT019200.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||||||||||||||||||=||
targets:938   GUAAGGCCUUGUUCGUUUGUGUCG   961

1.5 Zea mays clone Contig873.F mRNA sequence NA coding protein psRNATarget
BT041125.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||=||||||||||||||=||
targets:1258   AUGAGGUCUUGUUCGUUUGUGUCG   1281

2.5 Zea mays full-length cDNA clone ZM_BFc0177J19 mRNA, complete cds NA coding protein psRNATarget
XM_008647453.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||||||||||||||||||=||
targets:3267   GUAAGGCCUUGUUCGUUUGUGUCG   3290

1.5 PREDICTED: Zea mays uncharacterized LOC103627145 (LOC103627145), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008647452.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||||||||||||||||||=||
targets:3255   GUAAGGCCUUGUUCGUUUGUGUCG   3278

1.5 PREDICTED: Zea mays uncharacterized LOC103627145 (LOC103627145), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020538731.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||||||||||||||||||=||
targets:5235   GUAAGGCCUUGUUCGUUUGUGUCG   5258

1.5 PREDICTED: Zea mays UDP-glucose:glycoprotein glucosyltransferase (LOC103627875), mRNA NA coding protein psRNATarget
EU948349.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  ||||-||||||||||||||*|||||
targets:471   AUUAAGGCCUUGUUCGUUUAUGCCG   495

1.5 Zea mays clone 373385 mRNA sequence NA coding protein psRNATarget
EZ056395.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|*||||||||||||||||||=||
targets:31   CUAAGGCCUUGUUCGUUUGUGUCG   54

1.5 TSA: Zea mays contig57517, mRNA sequence NA coding protein psRNATarget
NM_001111367.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|*||||||||||||||||||=||
targets:1090   CUAAGGCCUUGUUCGUUUGUGUCG   1113

1.5 Zea mays Ferredoxin-6, chloroplastic (pco072676(750)), mRNA NA coding protein psRNATarget
JB166393.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||*|||||||||||||||||
targets:7   AUAAGGGCUUGUUCGUUUGUGCCG   30

1.0 Sequence 4057 from Patent EP2559767 NA coding protein psRNATarget
LQ238062.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||*|||||||||||||||||
targets:7   AUAAGGGCUUGUUCGUUUGUGCCG   30

1.0 Sequence 4057 from Patent EP2985353 NA coding protein psRNATarget
HI405932.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||*|||||||||||||||||
targets:7   AUAAGGGCUUGUUCGUUUGUGCCG   30

1.0 Sequence 4057 from Patent EP2074227 NA coding protein psRNATarget
HI407238.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||*|||||||||||||||||
targets:8   AUAAGGGCUUGUUCGUUUGUGCCG   31

1.0 Sequence 5363 from Patent EP2074227 NA coding protein psRNATarget
LQ239368.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||*|||||||||||||||||
targets:8   AUAAGGGCUUGUUCGUUUGUGCCG   31

1.0 Sequence 5363 from Patent EP2985353 NA coding protein psRNATarget
JB167699.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||*|||*|||||||||||||||||
targets:8   AUAAGGGCUUGUUCGUUUGUGCCG   31

1.0 Sequence 5363 from Patent EP2559767 NA coding protein psRNATarget
XM_008676360.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|||||*||||||||||||||=||
targets:1818   UUUAGGGCUUGUUCGUUUGUGUCG   1841

2.5 PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008676377.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|||||*||||||||||||||=||
targets:1892   UUUAGGGCUUGUUCGUUUGUGUCG   1915

2.5 PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008676366.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|||||*||||||||||||||=||
targets:1910   UUUAGGGCUUGUUCGUUUGUGUCG   1933

2.5 PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X4, mRNA NA coding protein psRNATarget
XM_008676374.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|||||*||||||||||||||=||
targets:1986   UUUAGGGCUUGUUCGUUUGUGUCG   2009

2.5 PREDICTED: Zea mays protein-O-fucosyltransferase 1 (LOC100281382), transcript variant X3, mRNA NA coding protein psRNATarget
EZ517098.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*|||=||||||||||||||=||
targets:94   GUAAGGUCUUGUUCGUUUGUGUCG   117

2.5 TSA: Zea mays cultivar W22 CL501Contig1.betc, mRNA sequence NA coding protein psRNATarget
BT083852.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *||=||*||||||||||||||=||
targets:350   CUUGGGACUUGUUCGUUUGUGUCG   373

2.5 Zea mays full-length cDNA clone ZM_BFb0047A08 mRNA, complete cds NA coding protein psRNATarget
LQ238065.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||**|||||||||||||||=||
targets:3   AUUAAACCUUGUUCGUUUGUGUCG   26

2.5 Sequence 4060 from Patent EP2985353 NA coding protein psRNATarget
HI405935.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||**|||||||||||||||=||
targets:3   AUUAAACCUUGUUCGUUUGUGUCG   26

2.5 Sequence 4060 from Patent EP2074227 NA coding protein psRNATarget
JB166396.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||**|||||||||||||||=||
targets:3   AUUAAACCUUGUUCGUUUGUGUCG   26

2.5 Sequence 4060 from Patent EP2559767 NA coding protein psRNATarget
BT035367.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||**|||||||||||||||=||
targets:1241   AUUAAACCUUGUUCGUUUGUGUCG   1264

2.5 Zea mays full-length cDNA clone ZM_BFb0057L05 mRNA, complete cds NA coding protein psRNATarget
NM_001138328.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||**|||||||||||||||=||
targets:1241   AUUAAACCUUGUUCGUUUGUGUCG   1264

2.5 Zea mays uncharacterized LOC100193173 (LOC100193173), mRNA NA coding protein psRNATarget
EU972216.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  ||||**|||||||||||||||=||
targets:1259   AUUAAACCUUGUUCGUUUGUGUCG   1282

2.5 Zea mays clone 377576 mRNA sequence NA coding protein psRNATarget
XM_020548712.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||*||||||||||||||||||
targets:2052   GUAAGACCUUGUUCGUUUGUGCCG   2075

1.0 PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008672661.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||*||||||||||||||||||
targets:2134   GUAAGACCUUGUUCGUUUGUGCCG   2157

1.0 PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020548713.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||*||||||||||||||||||
targets:2147   GUAAGACCUUGUUCGUUUGUGCCG   2170

1.0 PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X4, mRNA NA coding protein psRNATarget
XM_008672662.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||*||||||||||||||||||
targets:2176   GUAAGACCUUGUUCGUUUGUGCCG   2199

1.0 PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X6, mRNA NA coding protein psRNATarget
XM_008672660.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||*||||||||||||||||||
targets:2208   GUAAGACCUUGUUCGUUUGUGCCG   2231

1.0 PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020548714.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  =|*||*||||||||||||||||||
targets:2257   GUAAGACCUUGUUCGUUUGUGCCG   2280

1.0 PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X5, mRNA NA coding protein psRNATarget
LQ238000.1
ncRNA:20   CCGGAACAAGCAAACACGGC   1
  |||||||||||||||||=||
targets:1   GGCCUUGUUCGUUUGUGUCG   20

1.5 Sequence 3995 from Patent EP2985353 NA coding protein psRNATarget
JB166331.1
ncRNA:20   CCGGAACAAGCAAACACGGC   1
  |||||||||||||||||=||
targets:1   GGCCUUGUUCGUUUGUGUCG   20

1.5 Sequence 3995 from Patent EP2559767 NA coding protein psRNATarget
HI405870.1
ncRNA:20   CCGGAACAAGCAAACACGGC   1
  |||||||||||||||||=||
targets:1   GGCCUUGUUCGUUUGUGUCG   20

1.5 Sequence 3995 from Patent EP2074227 NA coding protein psRNATarget
XM_008649755.2
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|*|||||||||||||||*|||||
targets:891   CUAAGGCCUUGUUCGUUUCUGCCG   914

1.5 PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (cl16339_1), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020539029.1
ncRNA:24   UAAUCCGGAACAAGCAAACACGGC   1
  *|*|||||||||||||||*|||||
targets:1008   CUAAGGCCUUGUUCGUUUCUGCCG   1031

1.5 PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (cl16339_1), transcript variant X1, mRNA NA coding protein psRNATarget
LQ238077.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  *|||-|||||||||||*|||||||*
targets:2   UUUAAGGCCUUGUUCGGUUGUGCCU   26

2.5 Sequence 4072 from Patent EP2985353 NA coding protein psRNATarget
LQ238074.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  *|||-|||||||||||*|||||||*
targets:2   UUUAAGGCCUUGUUCGGUUGUGCCU   26

2.5 Sequence 4069 from Patent EP2985353 NA coding protein psRNATarget
HI405947.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  *|||-|||||||||||*|||||||*
targets:2   UUUAAGGCCUUGUUCGGUUGUGCCU   26

2.5 Sequence 4072 from Patent EP2074227 NA coding protein psRNATarget
JB166408.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  *|||-|||||||||||*|||||||*
targets:2   UUUAAGGCCUUGUUCGGUUGUGCCU   26

2.5 Sequence 4072 from Patent EP2559767 NA coding protein psRNATarget
HI405944.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  *|||-|||||||||||*|||||||*
targets:2   UUUAAGGCCUUGUUCGGUUGUGCCU   26

2.5 Sequence 4069 from Patent EP2074227 NA coding protein psRNATarget
JB166405.1
ncRNA:24   UAAU-CCGGAACAAGCAAACACGGC   1
  *|||-|||||||||||*|||||||*
targets:2   UUUAAGGCCUUGUUCGGUUGUGCCU   26

2.5 Sequence 4069 from Patent EP2559767 NA coding protein psRNATarget
© 2017 OPP-ncRBASE. All rights reserved.