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BaseInfo

ncRNA ID novel_zma_miR4513
Species Zea mays
Class miRNA
Genome position Chr2:28233346-28233430 [-]
Reference genome RefGen_v4
Source SRR2287161
Length 22
Mature sequence(if miRNA) 64 - AUGACCCAAACGAUAGUGCCAU - 85
Stem-loop(if miRNA) --    C    A        C  U  --UUUC        UUC
  AUGA CCAA CGAUAGUG CA AA      GACGAGGU   U
  |||| |||| |||||||| || ||      ||||||||   C
  UGCU GGUU GUUGUCAC GU UU      UUGCUUCA   C
CU    A    G        C  C  UUUCUU        CUA
Stem-loop sequence AUGACCCAAACGAUAGUGCCAUAAUUUCGACGAGGUUUCUCCAUCACUUCGUUUUCUUUUUCUGCCACUGUUGGUUGGAUCGUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY110138.1
ncRNA:22   UACCGUGAUAGCAAACCCAGUA   1
  ||||||||||||||||||*|||
targets:1341   AUGGCACUAUCGUUUGGGCCAU   1362

1.5 Zea mays CL1610_1 mRNA sequence NA coding protein psRNATarget
XM_008681432.2
ncRNA:22   UACCGUGAUAGCAAACCCAGUA   1
  |||||||*|||||*||||||||
targets:1188   AUGGCACAAUCGUCUGGGUCAU   1209

2.5 PREDICTED: Zea mays uncharacterized LOC103654595 (LOC103654595), mRNA NA coding protein psRNATarget
XM_008677323.2
ncRNA:22   UACCGUGAUAGCAAACCCAGUA   1
  |||||||*|||||*||||||||
targets:3563   AUGGCACAAUCGUCUGGGUCAU   3584

2.5 PREDICTED: Zea mays uncharacterized LOC103651643 (LOC103651643), mRNA NA coding protein psRNATarget