ncRNA ID | novel_zma_miR4509 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:146824621-146824798 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287161;SRR2287163;SRR5451004;SRR2089700;SRR2089701;SRR2089704 |
Length | 24 |
Mature sequence(if miRNA) | 155 - AUACACUGGCGGUUCACUUAACUA - 178 |
Stem-loop(if miRNA) |
--AUA                  CUA           GAAAACAAAUA   A    AG     G                U   CAAAU      CACUGGCGGUUCACUUAA   AAUCGUCAGUG           UUU CACU  CGGUU UUUUAAGUGAACCGCC GUG     A      ||||||||||||||||||   |||||||||||           ||| ||||  ||||| |||||||||||||||| |||     U      GUGACCGCCAAGUGAAUU   UUGGCGGUCAC           AAA GUGA  GCCAA AAAAUUCACUUGGCGG CAC     C CCAAG                  UAG           AUUUAUCGAGA   A    CU     -                U   AUAUA |
Stem-loop sequence | AUACACUGGCGGUUCACUUAACUAAAUCGUCAGUGGAAAACAAAUAUUUACACUAGCGGUUGUUUUAAGUGAACCGCCUGUGCAAAUAUCAUAUACACUGGCGGUUCACUUAAAAAACCGUCAGUGAAAAAGAGCUAUUUACACUGGCGGUUGAUUUAAGUGAACCGCCAGUGGAACC |