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BaseInfo

ncRNA ID	osa-miRf10047-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - AGUCCCGGUUGGUAACACAAACUGG - NA
Stem-loop(if miRNA)	G  AGC                     -----  -    ---   -  ACCAACCGGGACUAAAGAUCCC CUUUAGUCCCGGUU GU   ACCAACCGGGGCUAAAGAUCA     CC GGGA   UCU UU                      G |||||||||||||| ||   |||||||||||||||||||||     || ||||   ||| ||                      G GAAAUCAGGGUCAA CA   UGGUUGGCCCUGAUUUCUAGU     UC GGGC   GCU AC                      G               A  CAA                     AGAAA  A    CAA   U  GACAGUCCAGUACAGUCCGGGG
Stem-loop sequence	CUUUAGUCCCGGUUGGUAGCACCAACCGGGGCUAAAGAUCACCGGGAUCUUUACCAACCGGGACUAAAGAUCCCGGGGGGGCCUGACAUGACCUGACAGCAUUCGAACCGGGACUAAAGAUGAUCUUUAGUCCCGGUUGGUAACACAAACUGGGACUAAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015758314.1	ncRNA:25   GGUCAAACACAAUGGUUGGCCCUGA   1   ||=|||||||||||||||||||||| targets:917   CCGGUUUGUGUUACCAACCGGGACU   941 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK288424.1	ncRNA:25   GGUCAAACACAAUGGUUGGCCCUGA   1   ||=|||*|||||||||||||||||| targets:2392   CCGGUUAGUGUUACCAACCGGGACU   2416 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:25   GGUCAAACACAAUGGUUGGCCCUGA   1   ||=|||*||**|||||||||||||| targets:1380   CCGGUUGGUAAUACCAACCGGGACU   1404 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:25   GGUCAAACACAAUGGUUGGCCCUGA   1   ||*|||*|||||||||||||||||| targets:2399   CCCGUUGGUGUUACCAACCGGGACU   2423 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
HI404518.1	ncRNA:25   GGUCAAACACAAUGGUUGGCCCUGA   1   ||=|||*|||*|||||||||||||| targets:54   CCGGUUGGUGCUACCAACCGGGACU   78 Target Full Sequence	2.0	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:25   GGUCAAACACAAUGGUUGGCCCUGA   1   ||=|||*|||*|||||||||||||| targets:54   CCGGUUGGUGCUACCAACCGGGACU   78 Target Full Sequence	2.0	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
JB164979.1	ncRNA:25   GGUCAAACACAAUGGUUGGCCCUGA   1   ||=|||*|||*|||||||||||||| targets:54   CCGGUUGGUGCUACCAACCGGGACU   78 Target Full Sequence	2.0	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget
AK288377.1	ncRNA:25   GGUCAAACACAAUGGUUGGCCCUGA   1   ||=|||*||||||||||||*||||| targets:1387   CCGGUUGGUGUUACCAACCUGGACU   1411 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:25   GGUCAAACACAAUGGUUGGCCCUGA   1   ||=|||*||*||||||||||||||| targets:115   CCGGUUGGUUUUACCAACCGGGACU   139 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:25   GGUCAAACACAAUGGUUGGCCCUGA   1   ||=|||*||||||||||||||||*| targets:158   CCGGUUGGUGUUACCAACCGGGAGU   182 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:25   GGUCAAACACAAUGGUUGGCCCUGA   1   ||=|||*||||||||||||||*||| targets:1841   CCGGUUGGUGUUACCAACCGGAACU   1865 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
AK288624.1	ncRNA:25   GGUCAAACACAAUGGUUGGCCCUGA   1   ||=|||*||||||||||||*||||| targets:4964   CCGGUUAGUGUUACCAACCAGGACU   4988 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget
AK288463.1	ncRNA:25   GGUCAAACACAAUGGUUGGCCCUGA   1   |||*|*|*||||||||||||||||| targets:455   CCAUUCUAUGUUACCAACCGGGACU   479 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence	NA	coding protein	psRNATarget
AK061057.1	ncRNA:25   GGUCAAACACAAUGGUUGGCCCUGA   1   ===|||*||**|||||||||||||| targets:364   UUGGUUGGUAAUACCAACCGGGACU   388 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence	NA	coding protein	psRNATarget