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BaseInfo

ncRNA ID	novel_zma_miR4489
Species	Zea mays
Class	miRNA
Genome position	Chr1:164914009-164914105 [-]
Reference genome	RefGen_v4
Source	SRR1618882
Length	24
Mature sequence(if miRNA)	1 - AUACUCGGCAAAGACUCCGUCUCC - 24
Stem-loop(if miRNA)	--U      U             C G  AGGUA               U    GGCGGA UCUUUGUCGAGUG U UC     GACACUCGGCAAAGG A    |||||| ||||||||||||| | ||     ||||||||||||||| A    CUGCCU AGAAACGGCUCAU A GG     CUGUGAGCCGUUUCC C CCU      C             - G  -GCUG               U
Stem-loop sequence	UGGCGGAUUCUUUGUCGAGUGCUGUCAGGUAGACACUCGGCAAAGGUAACUCCUUUGCCGAGUGUCGUCGGGGAUACUCGGCAAAGACUCCGUCUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167100.1	ncRNA:24   CCUCUGCCUCAGAAACGGCUCAUA   1   |||||=||||||||||||||||=| targets:11   GGAGAUGGAGUCUUUGCCGAGUGU   34 Target Full Sequence	2.5	Sequence 4764 from Patent EP2559767	NA	coding protein	psRNATarget
HI406639.1	ncRNA:24   CCUCUGCCUCAGAAACGGCUCAUA   1   |||||=||||||||||||||||=| targets:11   GGAGAUGGAGUCUUUGCCGAGUGU   34 Target Full Sequence	2.5	Sequence 4764 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238769.1	ncRNA:24   CCUCUGCCUCAGAAACGGCUCAUA   1   |||||=||||||||||||||||=| targets:11   GGAGAUGGAGUCUUUGCCGAGUGU   34 Target Full Sequence	2.5	Sequence 4764 from Patent EP2985353	NA	coding protein	psRNATarget
JB166664.1	ncRNA:23   CUCUGCCUCAGAAACGGCUCAUA   1   **||||||*||||||||||||=| targets:1   CUGACGGAUUCUUUGCCGAGUGU   23 Target Full Sequence	2.5	Sequence 4328 from Patent EP2559767	NA	coding protein	psRNATarget
HI406203.1	ncRNA:23   CUCUGCCUCAGAAACGGCUCAUA   1   **||||||*||||||||||||=| targets:1   CUGACGGAUUCUUUGCCGAGUGU   23 Target Full Sequence	2.5	Sequence 4328 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238333.1	ncRNA:23   CUCUGCCUCAGAAACGGCUCAUA   1   **||||||*||||||||||||=| targets:1   CUGACGGAUUCUUUGCCGAGUGU   23 Target Full Sequence	2.5	Sequence 4328 from Patent EP2985353	NA	coding protein	psRNATarget
EZ114211.1	ncRNA:24   CCUCUGCCUCAGAAACGGCUCAUA   1   ||**||*|||||||||||||||=| targets:325   GGCUACCGAGUCUUUGCCGAGUGU   348 Target Full Sequence	2.5	TSA: Zea mays contig49872, mRNA sequence	NA	coding protein	psRNATarget