ncRNA ID | novel_zma_miR4478 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:212212481-212212644 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287161 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUACAGUGGUAGAGUAGGCAAUGA - 24 |
Stem-loop(if miRNA) |
--                G        U   G       A                            --        C   G   AUUGCCUACUCUACUA UGUAUAAA UUU AAGUUCA AUUCAUCAUAUGUUAAGAGAUACAAAAA  AGAGAAUU UGA G   |||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||  |||||||| |||   UAACGGAUGAGAUGGU ACAUAUUU AAA UUCAAGU UAAGUAGUAUACAAUUCUCUAUGUUUUU  UCUUUUAA ACU U AG                G        U   G       C                            UA        A   C |
Stem-loop sequence | AUUGCCUACUCUACUAGUGUAUAAAUUUUGAAGUUCAAAUUCAUCAUAUGUUAAGAGAUACAAAAAAGAGAAUUCUGAGGUCUCAAAAUUUUCUAUUUUUUGUAUCUCUUAACAUAUGAUGAAUCUGAACUUGAAAUUUUAUACAGUGGUAGAGUAGGCAAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008657758.2 |
|
2.5 | PREDICTED: Zea mays methylesterase 7 (LOC103635265), mRNA | NA | coding protein | psRNATarget |