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BaseInfo

ncRNA ID novel_zma_miR4478
Species Zea mays
Class miRNA
Genome position Chr1:212212481-212212644 [-]
Reference genome RefGen_v4
Source SRR2287161
Length 24
Mature sequence(if miRNA) 1 - AUACAGUGGUAGAGUAGGCAAUGA - 24
Stem-loop(if miRNA) --                G        U   G       A                            --        C   G
  AUUGCCUACUCUACUA UGUAUAAA UUU AAGUUCA AUUCAUCAUAUGUUAAGAGAUACAAAAA  AGAGAAUU UGA G
  |||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||  |||||||| |||
  UAACGGAUGAGAUGGU ACAUAUUU AAA UUCAAGU UAAGUAGUAUACAAUUCUCUAUGUUUUU  UCUUUUAA ACU U
AG                G        U   G       C                            UA        A   C
Stem-loop sequence AUUGCCUACUCUACUAGUGUAUAAAUUUUGAAGUUCAAAUUCAUCAUAUGUUAAGAGAUACAAAAAAGAGAAUUCUGAGGUCUCAAAAUUUUCUAUUUUUUGUAUCUCUUAACAUAUGAUGAAUCUGAACUUGAAAUUUUAUACAGUGGUAGAGUAGGCAAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008657758.2
ncRNA:24   AGUAACGGAUGAGAUGGUGACAUA   1
  *==|*||||||*|||||||||||*
targets:39   CUGUAGCCUACGCUACCACUGUAG   62

2.5 PREDICTED: Zea mays methylesterase 7 (LOC103635265), mRNA NA coding protein psRNATarget