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BaseInfo

ncRNA ID novel_zma_miR4475
Species Zea mays
Class miRNA
Genome position Chr1:266445541-266445642 [-]
Reference genome RefGen_v4
Source SRR2287161;SRR2287163;SRR5451004
Length 23
Mature sequence(if miRNA) 80 - AUAGGAUGUUUCCACUGACGGUU - 102
Stem-loop(if miRNA) --                 A         UAAGA                U
  AUAGGAUGUUUCCACUG CGGUUGUGU     UAACCGCCAGUGGAAA C
  ||||||||||||||||| |||||||||     ||||||||||||||||
  UAUCCUACAAAGGUGAC GCCAACACA     GUUGGCGGUCACUUUU A
UU                 C         UUGUG                A
Stem-loop sequence AUAGGAUGUUUCCACUGACGGUUGUGUUAAGAUAACCGCCAGUGGAAAUCAAUUUUCACUGGCGGUUGGUGUUACACAACCGCCAGUGGAAACAUCCUAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:23   UUGGCAGUCACCUUUGUAGGAUA   1
  |||||*|||||||||=|||||||
targets:81   AACCGCCAGUGGAAAUAUCCUAU   103

2.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget