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BaseInfo

ncRNA ID	novel_zma_miR4471
Species	Zea mays
Class	miRNA
Genome position	Chr1:202743020-202743173 [-]
Reference genome	RefGen_v4
Source	SRR1618882
Length	22
Mature sequence(if miRNA)	133 - UGAGUGACCCGUUUUGACGACC - 154
Stem-loop(if miRNA)	--                                                                   C  UU  G   UGAGUGACCCGUUUUGACGACCCGGCCUCGAAACGGUGUAUUUCGCAGAGCGGCAACCUAGAGUGAC UG  UU C   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||   ACUUACUGGGUAAAACUGCUGGGCCGGAGCUUUGCCACAUAAAGUGUCUCGCCGUUGGAUCUCACUG AC  AA C AA                                                                   U  UU  A
Stem-loop sequence	UGAGUGACCCGUUUUGACGACCCGGCCUCGAAACGGUGUAUUUCGCAGAGCGGCAACCUAGAGUGACCUGUUUUGCCAAAUUCAUGUCACUCUAGGUUGCCGCUCUGUGAAAUACACCGUUUCGAGGCCGGGUCGUCAAAAUGGGUCAUUCAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU945864.1	ncRNA:22   CCAGCAGUUUUGCCCAGUGAGU   1   ||||||||||||||||=||||| targets:792   GGUCGUCAAAACGGGUUACUCA   813 Target Full Sequence	1.5	Zea mays clone 288102 mRNA sequence	NA	coding protein	psRNATarget
XM_020552797.1	ncRNA:22   CCAGCAGUUUUGCCCAGUGAGU   1   **||||*||||||||||=|||| targets:159   ACUCGUAAAAACGGGUCGCUCA   180 Target Full Sequence	2.5	PREDICTED: Zea mays RHOMBOID-like protein 3 (LOC103654434), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008681265.2	ncRNA:22   CCAGCAGUUUUGCCCAGUGAGU   1   **||||*||||||||||=|||| targets:104   ACUCGUAAAAACGGGUCGCUCA   125 Target Full Sequence	2.5	PREDICTED: Zea mays RHOMBOID-like protein 3 (LOC103654434), transcript variant X3, mRNA	NA	coding protein	psRNATarget