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BaseInfo

ncRNA ID novel_zma_miR4467
Species Zea mays
Class miRNA
Genome position Chr1:271085442-271085622 [+]
Reference genome RefGen_v4
Source SRR2287161
Length 24
Mature sequence(if miRNA) 158 - AUACAGUGGUAGAGUAGGCAAUGA - 181
Stem-loop(if miRNA) --                                                G                 -        A       CAAAAA
  AUUGUCUACUCUAUUACUGUAUAAAAUUUUAAGUUCAAAUUCAUUAUA GUUAAGAGAUACAAAAA AGAAAACU UGAGAUA      A
  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||
  UAACGGAUGAGAUGGUGACAUAUUUUAAAGUUCAAGUUUAAGUAGUAU CAAUUCUCUAUGUUUUU UCUUUUGA ACUCUAU      U
AG                                                A                 A        G       UAAAAA
Stem-loop sequence AUUGUCUACUCUAUUACUGUAUAAAAUUUUAAGUUCAAAUUCAUUAUAGGUUAAGAGAUACAAAAAAGAAAACUAUGAGAUACAAAAAAUAAAAAUUAUCUCAGAGUUUUCUAUUUUUGUAUCUCUUAACAUAUGAUGAAUUUGAACUUGAAAUUUUAUACAGUGGUAGAGUAGGCAAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008657758.2
ncRNA:24   AGUAACGGAUGAGAUGGUGACAUA   1
  *==|*||||||*|||||||||||*
targets:39   CUGUAGCCUACGCUACCACUGUAG   62

2.5 PREDICTED: Zea mays methylesterase 7 (LOC103635265), mRNA NA coding protein psRNATarget