ncRNA ID | novel_zma_miR4467 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:271085442-271085622 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287161 |
Length | 24 |
Mature sequence(if miRNA) | 158 - AUACAGUGGUAGAGUAGGCAAUGA - 181 |
Stem-loop(if miRNA) |
--                                                G                 -        A       CAAAAA   AUUGUCUACUCUAUUACUGUAUAAAAUUUUAAGUUCAAAUUCAUUAUA GUUAAGAGAUACAAAAA AGAAAACU UGAGAUA      A   |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||   UAACGGAUGAGAUGGUGACAUAUUUUAAAGUUCAAGUUUAAGUAGUAU CAAUUCUCUAUGUUUUU UCUUUUGA ACUCUAU      U AG                                                A                 A        G       UAAAAA |
Stem-loop sequence | AUUGUCUACUCUAUUACUGUAUAAAAUUUUAAGUUCAAAUUCAUUAUAGGUUAAGAGAUACAAAAAAGAAAACUAUGAGAUACAAAAAAUAAAAAUUAUCUCAGAGUUUUCUAUUUUUGUAUCUCUUAACAUAUGAUGAAUUUGAACUUGAAAUUUUAUACAGUGGUAGAGUAGGCAAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008657758.2 |
|
2.5 | PREDICTED: Zea mays methylesterase 7 (LOC103635265), mRNA | NA | coding protein | psRNATarget |