Search result

BaseInfo

ncRNA ID novel_zma_miR4465
Species Zea mays
Class miRNA
Genome position Chr9:144413370-144413430 [+]
Reference genome RefGen_v4
Source SRR2287161
Length 24
Mature sequence(if miRNA) 1 - CGCGGCUCCUGGGCGCGGCAUCGC - 24
Stem-loop(if miRNA) ---   G    -      G  G A       G
   CGC GCUC CUGGGC CG C UCGCGCG U
   ||| |||| |||||| || | ||||||| G
   GCG CGGG GGCUCG GC G GGCGCGC U
UCG   A    C      -  G -       G
Stem-loop sequence CGCGGCUCCUGGGCGCGGCAUCGCGCGGUGUGCGCGCGGGGCGGCUCGGCGGGCAGCGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020551980.1
ncRNA:24   CGCUACGGCGCGGGUCCUCGGCGC   1
  |||=*|||||||*|||||||||||
targets:340   GCGGGGCCGCGCGCAGGAGCCGCG   363

1.5 PREDICTED: Zea mays putative cuticle collagen 91 (LOC109945669), mRNA NA coding protein psRNATarget
XM_008676049.2
ncRNA:24   CGCUACGGCGCGGGUCCUCGGCGC   1
  |||=*|||||||||||||||*|||
targets:1278   GCGGCGCCGCGCCCAGGAGCGGCG   1301

1.5 PREDICTED: Zea mays protein JINGUBANG (LOC103650457), mRNA NA coding protein psRNATarget