Search result

BaseInfo

ncRNA ID	novel_zma_miR4462
Species	Zea mays
Class	miRNA
Genome position	Chr9:9370225-9370312 [+]
Reference genome	RefGen_v4
Source	SRR2287161
Length	24
Mature sequence(if miRNA)	1 - AAGCUUAUGUCCGACGGCCACUCU - 24
Stem-loop(if miRNA)	--                  C  UCUGA A   C        CCC   AAGCUUAUGUCCGACGGC AC     C ACC UCGGAUGU   G   |||||||||||||||||| ||     | ||| ||||||||   UUCGAAUACAGGCUGCCG UG     G UGG AGCCUGUA   C UA                  A  --CCA C   C        UUG
Stem-loop sequence	AAGCUUAUGUCCGACGGCCACUCUGACAACCCUCGGAUGUCCCGCGUUAUGUCCGACGGUCGACCGUAGCCGUCGGACAUAAGCUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167420.1	ncRNA:19   CCGGCAGCCUGUAUUCGAA   1   ||*|||||||||||||||| targets:1   GGACGUCGGACAUAAGCUU   19 Target Full Sequence	1.0	Sequence 5084 from Patent EP2559767	NA	coding protein	psRNATarget
JB167420.1	ncRNA:24   UCUCACCGGCAGCCUGUAUUCGAA   1   *||***|||||||||||||||||* targets:35   CGAUAAGCCGUCGGACAUAAGCUC   58 Target Full Sequence	2.0	Sequence 5084 from Patent EP2559767	NA	coding protein	psRNATarget
HI406959.1	ncRNA:19   CCGGCAGCCUGUAUUCGAA   1   ||*|||||||||||||||| targets:1   GGACGUCGGACAUAAGCUU   19 Target Full Sequence	1.0	Sequence 5084 from Patent EP2074227	NA	coding protein	psRNATarget
HI406959.1	ncRNA:24   UCUCACCGGCAGCCUGUAUUCGAA   1   *||***|||||||||||||||||* targets:35   CGAUAAGCCGUCGGACAUAAGCUC   58 Target Full Sequence	2.0	Sequence 5084 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239089.1	ncRNA:19   CCGGCAGCCUGUAUUCGAA   1   ||*|||||||||||||||| targets:1   GGACGUCGGACAUAAGCUU   19 Target Full Sequence	1.0	Sequence 5084 from Patent EP2985353	NA	coding protein	psRNATarget
LQ239089.1	ncRNA:24   UCUCACCGGCAGCCUGUAUUCGAA   1   *||***|||||||||||||||||* targets:35   CGAUAAGCCGUCGGACAUAAGCUC   58 Target Full Sequence	2.0	Sequence 5084 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235057.1	ncRNA:24   UCUCACCGGCAGCCUGUAUUCGAA   1   =*****||||||||||||||||*| targets:6   GUCAAAGCCGUCGGACAUAAGCCU   29 Target Full Sequence	2.5	Sequence 1052 from Patent EP2985353	NA	coding protein	psRNATarget
JB163388.1	ncRNA:24   UCUCACCGGCAGCCUGUAUUCGAA   1   =*****||||||||||||||||*| targets:6   GUCAAAGCCGUCGGACAUAAGCCU   29 Target Full Sequence	2.5	Sequence 1052 from Patent EP2559767	NA	coding protein	psRNATarget
HI402927.1	ncRNA:24   UCUCACCGGCAGCCUGUAUUCGAA   1   =*****||||||||||||||||*| targets:6   GUCAAAGCCGUCGGACAUAAGCCU   29 Target Full Sequence	2.5	Sequence 1052 from Patent EP2074227	NA	coding protein	psRNATarget