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BaseInfo

ncRNA ID novel_zma_miR4458
Species Zea mays
Class miRNA
Genome position Chr9:53479233-53479334 [+]
Reference genome RefGen_v4
Source SRR2287161;SRR2287163;SRR2287164
Length 23
Mature sequence(if miRNA) 1 - AUAGGAUGUUUCCACUGACGGUU - 23
Stem-loop(if miRNA) --                 A         UAAGA   C            U
  AUAGGAUGUUUCCACUG CGGUUGUGU     UAA CGCCAGUGGAAA C
  ||||||||||||||||| |||||||||     ||| ||||||||||||
  UAUCCUACAAAGGUGAC GCCAACACA     GUU GCGGUCACUUUU A
UU                 C         UUGUG   A            A
Stem-loop sequence AUAGGAUGUUUCCACUGACGGUUGUGUUAAGAUAACCGCCAGUGGAAAUCAAUUUUCACUGGCGAUUGGUGUUACACAACCGCCAGUGGAAACAUCCUAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:23   UUGGCAGUCACCUUUGUAGGAUA   1
  |||||*|||||||||=|||||||
targets:81   AACCGCCAGUGGAAAUAUCCUAU   103

2.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget