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BaseInfo

ncRNA ID novel_zma_miR4456
Species Zea mays
Class miRNA
Genome position Chr9:30232581-30232629 [-]
Reference genome RefGen_v4
Source SRR2287161
Length 24
Mature sequence(if miRNA) 26 - GGUUGAAUAGUAGAAUAGAGCGGA - 49
Stem-loop(if miRNA) --GG UG      A          G
    U  AAUAGU GAAUAGAGCG A
    |  |||||| ||||||||||
    G  UUGUUA CUUGUCUCGC G
GGUU GU      -          C
Stem-loop sequence GGUUGAAUAGUAGAAUAGAGCGGAGCCGCUCUGUUCAUUGUUUGGUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU945197.1
ncRNA:24   AGGCGAGAUAAGAUGAUAAGUUGG   1
  ||||||||||||||||*|||||||
targets:106   UCCGCUCUAUUCUACUCUUCAACC   129

1.5 Zea mays clone 244184 mRNA sequence NA coding protein psRNATarget
BT084215.2
ncRNA:24   AGGCGAGAUAAGAUGAUAAGUUGG   1
  |||*||||||||||||*||||||*
targets:1038   UCCACUCUAUUCUACUCUUCAACG   1061

2.5 Zea mays full-length cDNA clone ZM_BFb0090B20 mRNA, complete cds NA coding protein psRNATarget