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BaseInfo

ncRNA ID novel_zma_miR4452
Species Zea mays
Class miRNA
Genome position Chr9:39783101-39783194 [-]
Reference genome RefGen_v4
Source SRR2287161;SRR2287162
Length 24
Mature sequence(if miRNA) 1 - GGAGUUGAGAAUGUGGGAGAUGGA - 24
Stem-loop(if miRNA) --A  G        A     -        ---AUG GAAUAUGCAUGUA
   GU UUCUAUGU CUCGA UCCAGCAG      A             G
   || |||||||| ||||| ||||||||      |
   UA AGGGUGUA GAGUU AGGUUGUU      C             U
AGG  G        A     G        AAAAAA GAAAGGUCUUUAU
Stem-loop sequence AGUGUUCUAUGUACUCGAUCCAGCAGAUGAGAAUAUGCAUGUAGUUAUUUCUGGAAAGCAAAAAAUUGUUGGAGUUGAGAAUGUGGGAGAUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY112403.1
ncRNA:24   AGGUAGAGGGUGUAAGAGUUGAGG   1
  |=*=||||||||||||||||||||
targets:220   UUGGUCUCCCACAUUCUCAACUCC   243

0.0 Zea mays CL4404_1 mRNA sequence NA coding protein psRNATarget